Tarenaya hassleriana (spider flower): 104802716
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Entry
104802716 CDS
T04125
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104802716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104802716
03009 Ribosome biogenesis [BR:
thj03009
]
104802716
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104802716
Spliceosome [BR:
thj03041
]
Complex A
U1 snRNP components
U1 related factors
104802716
Complex B
104802716
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
Pre-60S particles
Helicases
104802716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
RSRP
Motif
Other DBs
NCBI-GeneID:
104802716
NCBI-ProteinID:
XP_010524749
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MATAEAATASVGPRYAPEDPTLPQPWKGLIDGSTGVLYYWNPETNITQYERPSAPPPLLP
AGPPPSSATPKLAQIPVPSAGQVHQSQPDQLTSVKQVAQQNVTHGSDRQAAQEQGSALGH
GLQQPQQFSAHHVRPQMLQPGQQAPQQTHGHPAQLQAYQPMQLQQQQVLQNQHSQMPQQQ
SHQYGHSQQQYMGYQPYVMPQGPQNLHQAPQVGPRGQQFPGRQEYDSGGPNREEEEFHTE
KKTRFSQPHLQNVMGSSSQNIPFEANPAQMPRTGANLGHQHNGPPANMQHPTSSGQFQQP
GANLVHQQLGPSPQNHMDPTMLHQKSHPLPFESNKSYDSNLNARPGNGSYFNARVEGPVR
GSQQLHPATMPKDVRTGSGPLLNAVPGHPGALDPALGRSVHGTYGHTGPAFPNNPSLRPP
LLGPSDVSHLSPVEVYRQQHEVTTTGDNIPAPFITFEATGFPPEILRELHSAGFASPTPI
QAQTWPIALQSRDVVAIAKTGSGKTLGYLIPAFILLSHCRNDPRNGPTMLVLAPTRELAT
QIQDEAIRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKKIDFQQ
VSLLVLDEADRMLDMGFEPQIRRIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVN
IGSVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVG
RNFGAVVIHGDKSQGERDWVLNQFRSGKSSVLIATDVAARGLDIKDIRVVINYDFPTGIE
DYVHRIGRTGRAGATGVAYTFFSDQDWKYAPDLIKVLEGANQQVPPQVREIAMRGGGGGG
SGFPRDRGAMVSRFDSGGGSRWDSSGPAREVRAGGQFGGFGGRGMRDDSFGRGGGNRGRG
FTGGPGFGNSNGGRGGMQGRFGNNMDGFGRGRGGGRGFGRGGGGRFDQRRGGPMDRSRGR
SRSRSPELVRTWRGSRSRSRSRSRSRSYSRSRSRSWSRSRSRSPRYNRYRSRSRSYSRSP
SPSYERRERRPRVSGFDVKPPEPNPASAESHGNGVVEPEMKPPPAAGAGSVE
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcagaagcagctactgcttctgttggtccgagatatgccccagaggatcca
actcttcctcaaccttggaaaggattgatagatggaagcaccggggttttgtattactgg
aaccccgaaacgaatatcactcaatacgaaagaccttcagccccccctccactgttaccc
gctggccctccaccatcttcagcgacaccgaagctcgctcagattcctgtaccatctgca
ggacaagttcatcaatctcagccagaccagctaacatcggtaaagcaggtggctcagcag
aatgtaacccatggttctgacaggcaagctgcacaagaacagggctcagccctaggacac
ggtctacaacagcctcagcagttctcggcccaccatgtgagaccccaaatgttgcaaccc
ggccagcaagctcctcaacaaactcatggccatcctgcacagctacaggcttaccagccg
atgcagctgcagcagcagcaagtgttgcagaaccagcactctcagatgccgcagcagcaa
agccaccagtatgggcattcacagcaacagtacatgggttatcagccatatgtgatgcca
caagggcctcagaatttgcatcaagcaccccaggtgggcccccgtggtcagcagttccca
ggtcgacaagagtacgattcagggggaccaaatagggaggaggaagagttccacaccgag
aagaaaaccaggttttctcaaccgcatctacaaaatgtgatgggatcgtcatcccaaaat
atcccttttgaagctaatccagctcaaatgccgagaactggtgcaaacttaggtcaccag
cacaatggccctccagcaaacatgcaacatcccacttcatctggtcaattccaacaacct
ggggctaatctggttcaccagcagctaggacctagtcctcaaaatcacatggacccgaca
atgttgcaccagaaatctcatcctcttcctttcgaatcaaacaagagttatgatagtaat
ctaaacgctaggcccgggaatggctcctactttaatgccagagtagaagggccggtgagg
ggttcccaacaacttcatcctgcaacaatgcctaaagatgtaaggacaggtagcggtcca
ctgttaaatgctgtgcctggtcatcccggtgcattggatccagcacttgggcgcagtgtc
catggaacatatggacacactggtcctgcttttccaaataatccctcattgaggcctcca
ctccttggcccttctgatgtttctcatctctcacccgttgaagtctaccgtcagcaacat
gaagttacaacaacaggtgataatattccagctccattcatcacatttgaggccactggt
ttcccgcctgaaatactcagagagttgcattctgctggatttgcatctccaacaccaatc
caggctcaaacatggccaattgctctgcaaagcagggatgtagttgcaattgccaaaact
ggttctggtaaaacattgggatacctgattccggctttcattcttctaagtcactgtcgg
aacgatcctcgcaatggcccgacaatgttggttttagctcctactcgagagcttgccaca
caaatacaagatgaagccattaggttcggtcggtcttccaggatttcgtgcacttgcttg
tatggcggagctcctaagggtcctcaattgaaagagttggaacgaggagctgatattgtc
gtggcaactcctggccgtctaaatgatatattggaaatgaagaagattgatttccagcag
gtttcgttactcgttcttgatgaggctgaccgtatgcttgacatgggtttcgaacctcag
atccgaaggattgtgaatgaaataccccctcgaaggcaaactctcatgtatacagctact
tggccaaaagaagtaaggaaaatagctagtgatcttcttgtaaatccagtccaagtaaac
ataggcagtgtggatgagctggctgcaaacaaggcaataacacagtacgttgaagtagtc
ccgcaaatggagaaggagagacgtctagagcaaatcctcaggtcgcaagaacggggctcg
aaagttataatcttctgttcgacaaagaggctatgtgaccatcttgcacgtagtgtcggg
cgtaatttcggggctgtggtaatccatggagacaaatctcaaggtgagagagattgggtt
cttaaccagttccggagtgggaagtcctctgtattgatagctaccgatgttgcggcccgg
gggcttgacataaaagatataagagtcgtgatcaactatgattttccgacgggaattgaa
gactatgtccatcggattggaagaactggccgagctggtgcgaccggagtcgcgtacact
ttcttctcagatcaggactggaaatacgcacctgatttgatcaaagtcctggagggggca
aaccagcaagtgccgccgcaggtccgtgagattgccatgcgtggtggagggggcggtggc
tcgggtttccccagggacagaggggccatggttagtcggttcgattctggtggtggtagc
cgatgggactcttcaggacctgcaagggaagtcagagcaggtgggcagtttggcgggttt
ggtggccgtggaatgagagatgactcgtttgggcgtggcggcggaaacaggggtcggggt
ttcaccggtggtcctggttttggtaacagtaatgggggtagaggaggcatgcaagggcgg
tttggtaataacatggacgggtttggccgtggccgtggtggcggtagaggctttggacga
ggaggaggaggccggtttgatcagagaagaggaggacctatggataggagtagaggcaga
agtcgtagcagaagccctgagcttgttcggacatggcggggcagtcgtagccggagccgg
agccggagccggagccgaagctatagccgaagtcggagccggagctggtcgcggtctagg
agtcgaagcccaagatacaaccgttaccgtagcagaagtagaagctacagccggagccct
agcccaagctacgagagacgagaaaggcggccgagggtttctgggtttgacgtgaagcca
cccgagccgaacccggcatcggccgagtcccatggtaacggagttgtggagccggagatg
aaaccaccaccggcggctggagcaggttcagtggaataa
DBGET
integrated database retrieval system
