KEGG   Tarenaya hassleriana (spider flower): 104803002
Entry
104803002         CDS       T04125                                 
Name
(RefSeq) ubiquitin receptor RAD23c-like
  KO
K10839  UV excision repair protein RAD23
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03420  Nucleotide excision repair
thj04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104803002
  09124 Replication and repair
   03420 Nucleotide excision repair
    104803002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:thj03051]
    104803002
   03400 DNA repair and recombination proteins [BR:thj03400]
    104803002
Proteasome [BR:thj03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    104803002
DNA repair and recombination proteins [BR:thj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      104803002
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 TECR_N CUE Dsc3_N UBA_RAD5A Crinkler UBA_3 Rad60-SLD_2 Ubiquitin_4 Permuted_GreAB-C
Other DBs
NCBI-GeneID: 104803002
NCBI-ProteinID: XP_010525156
LinkDB
Position
Unknown
AA seq 407 aa
MKIFVKTLKGTHFEIEVKPEDTVADVKKNIETVQSPDVYPAAQQMLIHQGKVLKDETTME
ENKVAENSFIVIMLSKSKPASSGSSTASSAPTFQAPPVPPASTQPLIPVATPQPTPATAP
APAPAPAPAPAPAPAPAPAPAPAPAPATATAPSSAPAASETDVYGQAASNLVAGSNLEAI
IQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEVPPVTRPPASGGQPTN
PPAQSQQQPAVAPTSGPNANPLDLFPQGLPNVGSNTGAGTLDFLRNSQQFQALRAMVQAN
PQILQPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEGGEGGNIINQLAGGVPQAIQVT
PEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHIHEFDE
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgaagatttttgtcaaaactctaaagggtacgcacttcgagatcgaagtgaaacctgag
gatacggttgctgacgtgaagaagaatatagagacggtgcaaagccccgatgtatatcct
gctgcacaacagatgcttattcaccaagggaaagttctgaaagatgaaaccacaatggag
gagaacaaagttgctgagaacagttttattgtcatcatgttgtccaagagtaaaccagca
tcaagcgggtcctcaactgcatcttctgcgcctacatttcaagctcctcctgtaccccct
gcatcaactcagcctctgattcctgtagcaacaccacaacctacacccgcgacagcacct
gcacctgcacctgcaccagcacctgcacctgcacctgcacctgcacctgcacctgcacct
gcacctgcacctgcacctgcaactgcaactgcaccttcttcggctccagctgcatctgag
actgatgtttatggacaagcagcatcaaatctggtcgctggaagtaacttagaggccatc
attcagcagattcttgatatgggcggaggaagctgggaccgtgacactgttgtccgtgct
ctccgtgctgcgtataacaaccctgaaagagctgtggaatatctatactctgggatacct
gagcaagcagaagttccaccagttactcgtcccccggctagtggtggtcagccgacaaat
cctccggcacagtctcagcaacaacccgcagtggcacccacaagtggtcctaatgctaac
ccgttagatctcttcccgcagggtctgcctaatgttggatcaaatactggtgctggcaca
cttgatttcctgcgcaacagccaacagttccaagctcttcgtgcgatggtgcaagcaaat
cctcaaatcctacagcctatgctacaggagctggggaagcagaatccgcacttgatgagg
ctgattcaagagcatcaggccgacttcttacgccttataaacgaacccgttgaaggggga
gaagggggaaacataatcaaccaattggcgggaggagtgccgcaggcgatacaagtaacg
ccagaggaacgtgaagcaatcgaacggctggaggcaatgggattcgacagagcgctggtg
ttggaggtgttcttcgcgtgcaacaagaacgaagagttggctgctaactatcttctcgat
cacattcacgagttcgacgaataa

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