Tarenaya hassleriana (spider flower): 104803017
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Entry
104803017 CDS
T04125
Name
(RefSeq) uncharacterized protein LOC104803017
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104803017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104803017
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104803017
mRNA degradation factors
5'-3' decay
Decapping complex
104803017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
104803017
NCBI-ProteinID:
XP_010525174
LinkDB
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Position
Unknown
AA seq
784 aa
AA seq
DB search
MERSDSWDFNNFARASSDTALFDASQYEFFGQNVLEEVELGGLEDEVETTPVPGYADDDE
YHLFDKGEGAGLGSLSDMDDLATTFAKLNRVVTGPKHPGVIGDRGSGSFSRESSSATDWT
QDAELSSWLDQHMLDEQAQEAKRWSSQPQSSAHSNSLYRTSSYPQQQPQLHHYNSEPIIV
PESAFTSFPPPGIRSQQASPNHLHRAPSLPGGSQLTLSAPNVSPLSNSNLHMTGLSHASH
YGGNLARFASGGPTFGNMGQPHWFSDSGLLHGDHSGLLHSLVQQQQPQLPPRNGLLSSHL
ISLQQRQSLAHLAALQSQLYNSYPSPSHKGLFGAGEVRERKHRPSHRSRKNRGISQTASD
ISSQKSEGGLQFRSKYMTSEEIESILKMQHSNSHSNDPYVNDYYHQARLAKKSVGSRAKP
QFYPSHLKEHQSRSRNSTEQHPQVHIDALGKITLPSVRKLRALIEDSPPGSSDGSADHKG
SEKHLEQEPLVAARVTIEDSLGVLIEIDDIDRILQFNRPQDGGTQLRRKRQILLEGLATS
LQLVDPFSRTGQKAGLTAKDDIVFLRIASLAKGRKMLTKYLQLLVPGSEVARIVCMAVFR
HLRFLFGGLPSDTASAETIANLAKAVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGSP
VGDGASLVLISLFERAAEVQVPHVNHGNHNDGLWRASFDEFFTLLTKYCRSKYETIRCQN
QGNADVMELAIKKEMPAELLRASLRHTSEEQRNSLLSFGRKPSPIGESTSHGRGSQINSE
SVRG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggagagatccgattcctgggatttcaacaacttcgctcgggcttcctcagatactgca
ctctttgatgcatcccaatacgagttttttggtcaaaatgttctggaggaagtggaactg
ggcggtcttgaggatgaagtggagaccactcctgttccaggatatgctgatgatgatgag
tatcacttgtttgataaaggagagggtgcaggtttaggatctttgtctgacatggacgat
ctcgcgacaacttttgcaaagttgaacagagtcgttactggacccaaacatcctggagtt
atcggcgatagaggatcagggtccttttcaagggaaagttcatctgctacagattggact
caagatgcagagctttcaagctggttggatcagcatatgctagacgaacaagctcaggag
gctaagagatggtcctcacagccacaatcatctgcccattcgaattctttgtacaggaca
tcctcctatcctcagcagcaaccacaactgcatcactacaacagcgaacccattattgta
cctgaatcagctttcacatcttttcctccgcctggaatccgatctcagcaggcttcacct
aaccatctgcatcgtgctccttctcttcccggtggaagccaattgaccttatctgcccca
aatgtttctccactgtcaaattctaatctccatatgacgggattgtcacatgcatcccat
tatggtggtaatttggcaagatttgcctctggtggacctacatttggtaacatggggcaa
cctcattggttcagtgactctggcctcctacatggggatcattctggactattacatagt
ctggtgcaacaacagcaacctcaattgccccctcgcaatggtcttctgtcctcgcatttg
atttcccttcagcaaaggcaatctctagcccatcttgccgccttacaatcccagctgtat
aattcttatccttcgccatcacataaaggactgtttggggctggcgaagttagggagcgt
aaacataggccatctcatagaagccgaaagaacagaggcatctcccaaacggcgtcagat
atatctagtcagaaaagtgagggcggattgcaatttagatcaaagtacatgacttcagaa
gaaatagagagtattctcaaaatgcagcattccaattcacacagcaatgacccatatgtc
aatgattattaccaccaagctcgtcttgctaagaagtctgttggatcaagagcaaaacct
cagttctacccttctcacctgaaggaacaccaatctcgctcccgtaatagtactgaacag
catccgcaagttcacattgatgctcttggaaagattactcttccttctgttcgtaagcta
cgagccctcattgaggactctcctcctggatctagtgatggaagcgcggatcataagggc
tctgaaaagcatttggagcaggaacctctggtcgctgctagggttactattgaagactct
cttggagttcttattgagatagatgacatcgataggattttgcagttcaaccggccccag
gacggaggcactcagctcaggagaaagcggcagatcctgctggagggattagccacatca
cttcaacttgttgatccgttcagcagaactggtcagaaagctgggttgactgcaaaggat
gatatcgtttttctacgcattgcgtctcttgccaagggtcgaaagatgcttacaaagtat
ttacagcttcttgtcccaggtagtgaggttgcccggattgtttgcatggctgttttccgc
cacttgagatttctatttggtggccttccctctgacacagcatcagcagagacaattgca
aatcttgccaaggcagtcacagtttgtgttcaagccatggacctccgagcactgagtgct
tgtcttgcagcagttgtgtgttcttcagagcagccacctcttcgtcccattggaagccct
gtgggagatggtgcttctctcgtcttgatatctctttttgagagggctgccgaagtacag
gttcctcatgtcaaccatgggaatcataacgacggtctgtggagagcctcatttgatgaa
ttttttacacttctcacaaagtactgcaggagtaagtacgagacaatccgctgtcagaac
caggggaatgcagatgttatggagctagccataaagaaggagatgcctgcagagctttta
cgggcaagtctccgtcataccagtgaagagcagaggaactctttgctaagctttggtcgt
aaaccatcgcccatcggcgagtccacgtcccatggaaggggcagtcagatcaactctgaa
tctgtgaggggttaa
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