Tarenaya hassleriana (spider flower): 104803321
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Entry
104803321 CDS
T04125
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104803321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104803321
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104803321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
104803321
NCBI-ProteinID:
XP_010525548
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MHCKGFSDFYYYDDGFDHDDAYDYGYDIEDHVEAAAPKTKEEGSHQGIWRCAVCTYDNEN
VMSACDICGVLRHPSVGNQTTNKTAVEGLPRESMVSKMAKSLFEPVVSHTQKRAVLYPRE
HNNLVMDRGPLPGSAGGNIHELYKAFSCERSSVSIAHFKFDAPSPDDLVSSGLMSLKTGT
KGGSSMRLKEQINSADEQKSLKNGSGGSKRCFRGRENNIEDDNCSKDGASDIKSSKVLPK
AKPNISEEASSSAKTMEASESLTGMRNDLSLTGQAPNSSNVRNRRPRSESKYKPEEWILP
DKESDTLSQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLKGKGSFAYAW
ALDESAEERERGITMTVAVAYFDTKKHRVVLLDSPGHKDFVPNMIAGATQADAAILVLDA
CAGAFEAGFDNLKGQTREHARVLRGFGVEQVVVAVNKMDTVGYSKDRFDSIKQQVGTFLH
SCRFRDSSLIWIPLSSMENQNLVTAPSDSRLSSWYRGPCLLDAIDSLKSPARDFTKPLLM
PICDIVRTSKQGQVSAIGKLEAGAVRTGSKILVMPSGDVGTVRSLERDSRACSIARAGDN
VAMTLQGIDASQVIAGGVLCHLDFPVLVATRLELTVLVLEGATPILIGSQLEFHVHHAKE
AAIVVRIESLLDPKTGEATKMSPRCLTAKQSAILEVSLQGPVCVETFSESRALGRVFLRS
LGRTVAMGKVTRVIQH
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtaaaggattctccgatttctactactatgatgatggttttgatcatgacgat
gcttatgactatggctatgacatagaggatcatgtcgaagctgctgctcctaaaaccaag
gaggaaggttcccatcaagggatttggcgatgtgcagtctgtacatacgataatgaaaac
gtcatgtccgcttgtgatatttgcggtgttcttcggcatccctctgttggcaatcaaact
accaataagactgcagttgaaggcctacccagagaatccatggtatccaagatggccaag
tctctttttgagccagtggtgtctcatacacaaaaaagggctgtcctatatccacgggaa
cataataatcttgtgatggaccggggacctctgcctggaagtgccggagggaatattcat
gagctctacaaggcttttagttgtgaaagatcttctgttagtatagcacatttcaagttt
gatgctccatcgcctgatgatttggtttccagtggactaatgtctttgaaaacgggtaca
aaaggtggttcaagcatgagactgaaagagcaaataaatagtgccgatgagcagaaatct
ttgaagaacggaagtggcggttcaaaaagatgtttcagaggtagagagaataacattgaa
gatgataattgctccaaggatggtgctagtgacataaaatcaagcaaagttttgccaaaa
gctaaaccaaatatttctgaggaggcaagttcttcagctaaaactatggaggcatcagaa
agcctcactggtatgaggaacgacttgtctttgacgggtcaagctccaaattctagtaat
gttagaaatagaagaccgagatcagaatccaagtacaagccggaggagtggatacttcct
gacaaagaatcagatacattaagtcaacttaatcttgccattgttgggcatgtagattcg
ggtaagtcaacactttctggtagattattgcatctgttgggaaggatatctcagaagcaa
atgcacaagtatgagaaagaagcaaagttgaagggcaaaggatcctttgcctatgcttgg
gcactggatgagagtgctgaagagagagaacgaggaattacgatgacagtggctgttgcc
tatttcgataccaagaaacaccgtgttgtcttgctcgactctcctggacacaaagatttt
gttccaaatatgatagccggagcaacacaagcagatgccgcgattcttgtcttagatgcg
tgtgcaggagcttttgaagctggtttcgataatttgaaaggccagacaagagagcatgca
cgagttcttagaggttttggggtcgagcaggttgtggtggcagtcaacaaaatggatact
gttggatattccaaggatcgatttgattcgattaaacagcaagtagggacattcttgcat
tcttgtcgttttagagattcatctctaatatggattccattgagttccatggaaaatcaa
aacttggtgacagctccatctgacagccgtctatcctcatggtaccgaggcccgtgttta
ttggatgctatcgattctctgaaatctcccgctagagatttcactaagcctctgcttatg
cccatatgtgatatcgtacgaacaagtaaacaagggcaggtttctgccattggcaaactg
gaagctggagctgttcggaccggatccaagatattagtcatgccatcgggagatgtcggg
acagtgcggtctttggagcgtgattctcgggcttgtagcatcgcgagagctggagataat
gtagcgatgactttgcaagggattgatgcaagtcaagtgattgctggaggcgttctttgc
catctcgatttcccagttctagtggcaactcgcttggaacttacagtgctcgtcttggaa
ggtgcaaccccgattttgattggctcccagttggagtttcatgtacaccatgcaaaggaa
gcagccatagttgtgagaattgaatcattgctcgatccgaaaaccggggaggccacaaag
atgtcccctcgttgtctaaccgcgaagcaaagcgcaattctcgaggttagtcttcaagga
cctgtctgtgtggagacattctcggagagccgagctcttggaagagtgttccttcgatct
ttgggaagaactgtcgctatgggaaaagtcactagggttatccaacactga
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