Tarenaya hassleriana (spider flower): 104804044
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Entry
104804044 CDS
T04125
Name
(RefSeq) protein CHROMATIN REMODELING 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104804044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thj03036
]
104804044
03400 DNA repair and recombination proteins [BR:
thj03400
]
104804044
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104804044
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104804044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
AAA_34
Motif
Other DBs
NCBI-GeneID:
104804044
NCBI-ProteinID:
XP_010526496
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MEEEEDKFLLSSLGVTSANPEDIEQTILNEAKKKLEDGEGGSAVGEPSGQLELERTDTLP
SSHSELLSKLRAVEFEIDAVSSTVEDVAKDDSLKKNGDEAHIQAPHNRSSLQHALATDRL
RSLKKRKAQFEKELSGLHGDGVSEGIDRDNLLRNLVKEEPSLKRKSKEALKPGKKERKKV
KTVSIHDDPDFDAVLDAASAGFVETERDELVRKGILTPFHKLEGFERRLQQPGPSNWHNI
PEQDDENDNDEDSASIARAVQSMSLAAKARPATKLLEAKELPKLEAPTIPFKRLRKPYKT
HHDSPEKETENGKTAMAKKKRPLPERKWQKQISREDIDLQDSEDRQRNSTISSCEEEQLD
EDDDRGHNETSFVLLEGGLKIPENIFSKLFEYQRVGVQWLWELHCQRAGGIIGDEMGLGK
TVQVLSFLGSLHFSKMYRPSIVICPVTLARQWRREARKWYPGFHVEILHDSAQDSGHGKG
RGKASDSDYDSEGEVDSDNERNSSKNIKKWDSLIKRVLRSDSGLLITTYEQLRLLGEKLL
DIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGK
LGVLPVFEAEFAVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLPK
KTEHVLFCSLTAEQRSVYRAFLASTEVEQILDGNKNSLYGIDVMRKICNHPDLLEREHSH
QNPDYGNPERSGKMKVVAEVLKVWREQGHRVLLFSQTQQMLDILESILAGSGYSYRRMDG
LTPVKQRMAMIDEFNNSDDVFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARER
AWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFSL
NDDGDSNGGSTETSNIFGQLSGEINIVGAQTDKQSKAEENSPEEGSSGNKEMETRDKGDK
ATDDEETNILKSLFDTHGIHSVVNHDAIVNADDEEKMRMEQKASEVAQRAAEALRQSRML
RSRESISVPTWTGRSGCAGAPSSVRTRFGRVAHSATADDAPSAGKNGIGAGLPSGKAPSS
AELLARIRGSREQAIGAGLEPRSSLRSSREPSGLQPEVLIRQICSFLQERGGRTDSASIV
ERFKDRVPPTDMPLFKNLLKEIATLQRDRNGSFWVLKPEYKD
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaggaggataaattcttgttgagtagtttaggggtgacatctgcgaatccc
gaagatatcgaacagacgatactaaacgaggcaaagaagaaattagaggatggggagggt
gggagcgcagtgggtgagccctctggtcagttggagttggaaagaactgatacattgcct
tctagccattcggagcttttgagtaaattaagggctgtagagtttgaaatagatgctgtt
tcttcgactgtcgaggacgttgcaaaagatgatagcttaaagaaaaacggcgatgaagct
catattcaggctccgcataatcgttcttcactccagcatgccctagccaccgaccgtcta
agaagccttaagaaaagaaaggctcaatttgaaaaggagctgtctggtttacatggcgac
ggtgtttctgagggtattgatcgtgataatctactgagaaatctggtgaaggaagagcct
agtctcaagagaaaatcgaaagaggctctcaaaccaggcaagaaagaaaggaagaaggtg
aagactgtctcaattcatgatgaccctgatttcgacgctgtccttgatgcagcttctgca
ggttttgttgaaacggaaagggatgaattggtcagaaaaggaattttaactccgtttcac
aagcttgagggatttgaacgtcgacttcaacaaccagggccatccaattggcataacatt
cctgaacaagatgatgaaaatgacaacgatgaggactctgctagtattgctagagctgtt
caatcgatgtctttggctgcaaaagctcgcccagctaccaagctgctggaagcaaaagag
ttgccaaagcttgaggcacctactattccttttaaaaggctaagaaaaccttataagact
catcatgattctccggaaaaggaaacggagaatggaaaaactgctatggctaaaaagaaa
cggcctttgccggagaggaaatggcaaaagcagatttcccgtgaagatatcgatcttcag
gatagcgaagataggcagagaaactcaaccatttccagctgtgaggaagaacagctagat
gaagatgatgacagaggccataacgagacatcatttgtattgcttgaaggtggattaaaa
attcctgaaaacatattcagtaagcttttcgaataccaaagagttggagtgcagtggctc
tgggaacttcactgtcaaagggctggtggcattattggggacgagatgggtcttggtaag
actgtacaggtcttatcttttctcggatccttgcatttcagcaagatgtacagaccaagc
attgtcatatgccctgttactcttgcacgccaatggaggagagaagcacggaaatggtac
ccaggttttcacgtggagatactccatgactcagcgcaagattctggacacgggaaagga
cgaggcaaggcctctgatagcgattacgacagtgaaggtgaagttgacagtgacaatgag
agaaactcgtccaagaacatcaagaaatgggactctttgataaagcgggttctgagatct
gactcgggcctgctcatcaccacgtatgagcaactgcgacttctgggcgagaagctgctt
gatattgaatggggttatgcagtattggatgaaggtcaccgtatcaggaatccgaatgcc
gagatcactctggtgtgcaaacaactacagaccgtccaccggataatcatgactggtgca
ccgattcagaataagctgacggaactctggtcgttatttgattttgttttcccagggaag
ctcggggttttgcctgtattcgaggcagagtttgcggtacccataaccgttggcggttac
gcaaatgcttctcctttgcaagtatcgacggcctatcgatgtgctgttgttcttcgtgat
ttgatcatgccctacttactccgacgcatgaaggctgatgtgaatgctcaccttccaaag
aagactgaacatgtcctcttctgcagcctcaccgcggagcagcgatctgtctacagagcg
ttcctcgcgagcaccgaggtggaacagattctggatggcaataagaattctctgtacggg
atcgatgtgatgcgtaaaatatgcaatcacccggatctactcgaaagagagcattctcat
cagaacccggattacggaaacccggaacgaagcgggaagatgaaagttgttgcagaagtg
cttaaggtgtggagagagcagggtcatcgcgtgctattgttttcacagacgcagcagatg
ctcgacattctcgagagcattttggctggaagtggatacagttataggaggatggacggg
cttacaccagttaaacagaggatggcaatgatcgatgagttcaataactccgatgatgtg
ttcgtcttcattctgactacaaaggtgggagggctggggacgaacctgactggtgcgaac
cgggtcatcatcttcgatccggattggaacccttccaatgatatgcaggctagggaacgt
gcatggcgtataggccagaagaaggatgttactgtttacagattgatcacacgagggacg
atagaggagaaggtataccatcgacagatttacaagcacttcctcaccaataagatcctg
aagaatccgcaacagagaagattctttaaagcccgggacatgaaagatctcttttccttg
aatgacgatggtgacagcaatggcggctcaactgaaacctctaacattttcggccagctc
tctggagagataaatatcgtaggagctcaaacagataagcaaagcaaggcggaggaaaat
tcccccgaagaaggatcctcaggcaataaagagatggaaactagagataaaggtgacaaa
gccacggatgacgaggagacaaatatcttaaagagtctattcgatactcatggaatacat
agtgtggtgaatcatgacgcaatcgtgaatgcagacgacgaagagaagatgaggatggaa
cagaaagcatcggaggtcgcacagagagcggcagaggcactgcgtcagtcacggatgctc
cgtagtcgggaaagcatctctgtgccgacatggacgggaagatctggttgtgcgggtgcc
ccttcgtctgtccggacgagattcggacgggtggcccattctgctactgccgatgacgca
ccatcggccggcaagaacggaatcggtgcaggcctgccttcggggaaagctccgtcttct
gcagaactgctggccaggatccggggaagccgggaacaagccattggtgcggggcttgag
ccacggtcatcactcaggtcgtcccgtgagccgtcggggttgcagccagaggttctgata
cggcagatatgcagctttttgcaggaaagagggggaaggacggactcagcgagcattgtt
gagcgtttcaaggacagagtgccaccaacggacatgccactgttcaagaacctcttgaag
gaaatagctacgctccagagggaccgaaacggttcgttttgggtcctcaaacctgagtac
aaagactga
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