KEGG   Tarenaya hassleriana (spider flower): 104804120
Entry
104804120         CDS       T04125                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
thj  Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:thj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:thj04131]
    104804120
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:thj04147]
    104804120
Membrane trafficking [BR:thj04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    104804120
Exosome [BR:thj04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104804120
  Exosomal proteins of bladder cancer cells
   104804120
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd TPR_COPA_B Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_SPT8 NBCH_WD40 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 104804120
NCBI-ProteinID: XP_010526595
LinkDB
Position
Unknown
AA seq 1217 aa
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
RSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDGTKRTGLQTFRREHDRFWILAVHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDSLFYAKDRFLRYYEFSTQRDSQVIPIRRPG
TPSLNQSPRTLSYSPTENAVLICSDVDGGSYELYIIPKDSVGRSDSVQEAKRGSGGSAVF
IARNRFAVLEKSTNQVQVKNLKNEVVKNSSLPIPTDAIFYAGTGNLLCRSEDRVVIFDLQ
QRLVLGDLQTPFVRYIVWSNDLETVALLSKHTIIIASKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHMKYCLPNGDSGIIQTLNIPIYITKVSGNNVFCLDRDGKNRVIAIDATEYI
FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
GIAVEAAKEIDEKDLWYRLGVEALRQGNAKIVEFAYQRTKNFERLSFLYLITGNMEKLSK
MMKIAEVKNDVMGQFHDALYLGDVRERVKILEGAGHLPLAYITASVHGLHDIAERLAAEL
GDNIPTLPEGKTPSLLMPPPPVMGGGDWPLLRVMKGIFEGGLESGVRGAVDEEDDGEGDW
GEELDVVDIDGIQNGDAEEIMEDGEVGEENDEEGGWELEDLELPPELETPKVSANSRSAV
FVAPTPGMPVSQIWTQKSSLAAEHAAAGSFDTAMRLLNRQLGIKNFTPLKSMFLDLFAGS
YSYLRAFSSSPVVSLAIERGWNESASPSIRGPPALAYNFSQLEEKLKAGYKATTAGKFTE
ALRLFLSILHTIPLVVVESRREVDEVKELIIIVKEYVLGLQMELKRREMRDDPVRQQELA
AYFTHCNLQTPHLRLALLSAMSVCYKAKNLATASNFARRLLETNPTVESQAKMARQVVQA
AERNMTDAAKLNYDFRNPFVTCGATYVPIYRGQKDVLCRYCTARFVPSEEGKLCSVCDLA
VIGADASGLLCSPSQVR
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgctgacgaagttcgagacaaagagcaacagagttaagggtctgagcttccacagcaaa
aggccatggattcttgcgagtttgcacagtggtgtgatccagctgtgggattatcgtatg
gggactttgatcgatagattcgacgagcacgagggacctgtccgtggtgttcatttccac
agatcacagcctttgttcgtctcgggaggggatgattacaagattaaggtttggaactac
aaaacgcacaggtgcctcttcactctacttgggcatcttgattatatccgcacggtccag
tttcaccatgagtacccatggattgtgagtgctagtgacgatcagactatccgcatatgg
aactggcaatcacggacctgtatttctgtcttgactggtcacaatcattacgttatgtgt
gcttctttccatccaaaagaagaccttgttgtatcagcctccttggatcagactgtccgt
gtttgggatattggcgctcttaggaagaagaccgtatctcctgctgatgacatcctgagg
ttgagtcaaatgaacactgaccttttcggcggtgttgatgctatagtcaagtatgtccta
gaaggtcacgatagaggagtaaattgggcagctttccatcccaccctgcctctcatagtc
tctggtgcagatgatcgccaagtgaagttgtggcgcatgaatgaaactaaggcctgggaa
gtggacacactccgaggccatatgaataatgtgtcatgcgttatgttccatgccaagcag
gacattattgtatctaactctgaagataaaagcatccgtgtctgggatggtaccaagcga
actggactccaaactttccgccgtgaacacgacaggttctggattcttgcggttcaccct
gagatgaatctactggcagcaggacatgacagcggaatgattgtctttaaacttgagaga
gaacgccccgcattttctgttagtggtgattccttgttctatgccaaggatagatttttg
cgttactacgagttctcgactcaaagagactcgcaagtcatccctatacgacgtcctggt
accccaagcctgaaccaaagtccaaggactttatcttacagccccacagaaaatgccgtt
ctgatctgctcagatgttgatggtggttcttatgagttgtacatcattccaaaagatagt
gttggtaggagtgactctgtgcaagaggcaaagaggggctctggaggctctgcggtattt
atagctcgaaatcggtttgctgtgctggagaaaagcaccaaccaagtgcaggtcaagaat
ctcaagaacgaggtggttaaaaatagttccctgccaattcctaccgatgctattttttat
gctggaacaggaaatttgctttgcagatctgaggatagagtggttatatttgaccttcag
caaaggctggttcttggtgaccttcagaccccttttgtcagatacattgtttggtctaat
gacctggagactgtcgctttactcagcaagcatactatcatcattgccagcaagaagctt
gtccaccaatgcacccttcatgagacaatacgtgtgaagagtggagcttgggatgacaac
ggtgttttcatatacacaactttgaaccatatgaaatattgtctcccgaatggagatagt
ggaataatccaaactctcaatatccctatctatatcacaaaggtttctggtaataatgtc
ttctgtttggaccgggatgggaaaaacagggttattgccatcgatgcaacagaatacatt
ttcaagctttcactgttgaggaagaggtatgatcatgtcatgagcatgattaggaattcc
caattgtgtgggcaggctatgattgcttacctgcaacagaaaggattcccagaagttgcc
ctccattttgtgaaagatgaaaggactcggttcaacctggctttggaaagtggtaacatc
ggtattgctgttgaagcagctaaagagatcgacgagaaagatctctggtacagacttggg
gtggaggctctccgacaaggtaatgctaaaattgtggagtttgcctaccagcggacaaag
aactttgagaggctatctttcctctatctcatcactggcaatatggaaaagctgtccaag
atgatgaagattgctgaagttaagaatgacgtgatgggtcaatttcacgatgccctctac
cttggggatgtgagagagcgtgttaagatcctggaaggtgctgggcatttgcctcttgct
tatatcacagcttcggttcacggtttacatgacattgctgagcgtctggcggctgagtta
ggagacaacattcccactctgcccgaaggtaaaactccatcgcttctaatgccaccgcct
cccgtcatgggtggtggtgattggccccttctgagagttatgaaaggaatatttgaagga
gggcttgagagcggtgtcagaggggcagttgatgaagaggatgacggcgaaggtgattgg
ggcgaggagcttgacgtggttgatattgacggaatacagaatggggacgcagaagaaatt
atggaggatggagaagtgggtgaagaaaacgacgaggaaggtggatgggaactcgaagac
ctggaactcccgccagagctcgaaacaccgaaggtgtctgccaattcacgttctgcagtc
tttgtggcaccgactccgggcatgcccgtaagtcaaatctggacccagaaatcatcactt
gctgctgaacacgcagcagctgggagcttcgataccgctatgcgattgctgaacagacag
ctcggcataaagaattttacgccgttgaaatccatgttccttgatctgtttgcgggcagc
tacagctatctgcgtgcgttttcttcatctcctgtggtatccctcgccatcgaacgtgga
tggaacgaatctgccagtcccagcatccgtgggccgccagcccttgcttacaatttctct
cagctggaagagaagctcaaggccggttacaaagccacgactgccggaaaattcacagag
gctcttcgtcttttcctctccatcctccacaccatccccctcgtggtagtggagtcaagg
agagaagtcgacgaagtcaaggagctgatcattatcgttaaagaatacgtcctcggtttg
caaatggagctcaagaggagggaaatgagagatgatcctgtacggcagcaggagctagct
gcttatttcacccactgcaatctgcaaacgcctcacctaaggctcgcccttctcagcgca
atgagcgtctgctacaaggcaaagaaccttgccacggcttctaacttcgccaggaggtta
ctagaaacaaacccgacagtggagagccaggccaagatggcgaggcaagtcgtgcaggcc
gccgaacgcaacatgactgacgcagccaagctgaactacgatttcagaaacccgtttgtg
acatgtggggccacctatgtcccgatctatcggggtcagaaggacgtgttgtgtcgttac
tgcacggctcggtttgtgccaagtgaggaaggtaagctctgttctgtctgcgatctcgct
gtcattggggcagacgcttcaggattgctatgctctccttctcaagtccggtga

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