Tarenaya hassleriana (spider flower): 104804355
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Entry
104804355 CDS
T04125
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104804355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thj03021
]
104804355
03036 Chromosome and associated proteins [BR:
thj03036
]
104804355
Transcription machinery [BR:
thj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104804355
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104804355
PBAF complex
104804355
GBAF(ncBAF) complex
104804355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
ZZ_ADA2
EAP30
Motif
Other DBs
NCBI-GeneID:
104804355
NCBI-ProteinID:
XP_010526925
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MEERRRDAGTLASADIAGGSPASEPATRRRAGALKRKANAVGASNSSSTPSKRMMTREKA
MLASLSPVQNGPLTRARQAPSALASSATAAGVVKQEMVNAAEAAVGEKPKDEEELNQAIR
EWEALEAKIEAEFEAIRSRDSNAHVVPYHCGWFSWQKIHPLEERSLPSFFNGKSEGRTSE
VYMEIRNWIMRKFHSNPNMQIELKDLTELEVGDSDAKEEVLEFLDFWGLINFHPFLPAES
GSAAVDDDEVEDKDSLLNSLYHFQAVEACPAPVLRPNLTAQAIPSGLFPESMVSDDLMKQ
EGPEVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFGSDMSSSDFILMEPAEAPG
AGSGKWTDQENLLLLEALELFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDDK
EPGSKKPADSVASKDGKSVEKDAPESTERVNDGESLTSPKDFPQPGDDNEGKISQESSKT
EDASQEANEVKVDQNTSKPDTVNDVTCKDEAGEDIALKALAEAFEDVGYPLKAETNLSFA
DLGNPVMGLAAFLVRLTESDVATASVRASLKYADSSSPGLWLATNNCFFLEDPPDNKKDS
TGFESVDAEVNHHNTQKDEQPEERSQERKDQSLTADGVEISNTDQSKETQDSVSGEKQPG
SPTDESSRNPDALREKSKTSLLDKSSEKELLREKDSEKDVNKLSGESKEPCQVTYSQSDV
DASQPAKTATDVEMVDTFASSKETHDTTAKDMQDEVQEAKENTKDVLVAPNTSNGQQPVR
SASPSTNGATDEDSNKEGKKEKHLCEVTEDKSNMGKLKRAAVSALCAAAVKAKHLAKQEE
DQIRQLSVSLIEKQLHKLEMKLTVFSEMENLTMRVREQLERSRQRLYHERAQIIAARLGV
PPTSSSSSKASLPTNRIAANFANVVPRPPPIGMAYPRPPIPRPMATSVLAGSSGPPPPPG
SDNVS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagacgtcgcgatgccggaaccctagcctcggcggatatcgctggaggttct
ccggcgtcggagccggcgacaaggcgacgagccggagctcttaagaggaaggcgaacgcc
gtcggggcatcgaattcctcttccacgccgtcaaagcggatgatgacgcgggagaaggcg
atgcttgcgtctctttcaccggtccagaacggtccgctaactagagctcgtcaggcgccg
agcgcccttgcgtcgtcggctaccgcagcgggggtggtgaagcaggagatggtgaacgcc
gcggaggcggcggtcggcgagaagccgaaggatgaggaggaattgaaccaggcgatccga
gagtgggaggcgttggaggctaagatcgaggctgaatttgaagctattagatctcgcgac
agtaatgctcacgttgtgccttatcattgtggttggttttcatggcaaaagattcatcct
ctagaggagcgttcgcttccctcattctttaacgggaagtctgaaggccgtacttctgag
gtttatatggaaatacgaaattggatcatgaggaagtttcattcaaacccaaacatgcag
atagagctgaaagatttaacagaacttgaggttggtgactcagatgcgaaagaggaggtg
ctggaattcttggatttctggggtttgatcaattttcacccatttctaccagcagaatct
ggttctgctgctgttgatgatgacgaggtagaagataaggattcactgcttaacagttta
taccactttcaagcagttgaggcttgcccagctcccgttcttaggcctaatctcacggca
caagctattccatcaggattgtttccggagtcgatggtatctgatgatttgatgaagcag
gagggtcctgaggtggaataccactgtaactcctgttcagctgattgctctcgcaagcgt
taccattgcccaaagcaggctgattttgacttatgtacggaatgctttaacagcggcaag
tttggctcggacatgtcttcttctgattttattcttatggagcctgctgaggcccctggt
gcgggtagtgggaagtggactgatcaagagaatcttcttctccttgaagccttagaactc
ttcaaagaaaactggaatgagattgcagagcatgttgctacgaaaacaaaagctcagtgt
atgctgcattttcttcaaatgccgatagaggatgcatttcttgatcaaattgacgataaa
gaaccaggctcaaaaaaacctgctgattcagttgcatctaaggatggcaaatctgttgaa
aaagatgcacctgaatcaacagagcgtgttaatgacggtgagagtttgacttctcctaag
gactttccgcaaccaggagatgacaatgaagggaaaatttctcaggaatcttcaaaaact
gaagatgcaagtcaagaggcaaatgaagtgaaagttgaccagaacacgtcaaaaccggac
accgttaatgatgtaacatgtaaagacgaggcaggagaagacatcgctctgaaagctctt
gcagaagcatttgaagatgttggatatcccttaaaggctgaaactaacctttcctttgct
gatttaggaaatcctgtcatgggattggcagcctttctggtgagattgacggaatctgat
gttgctacggcttcggtccgtgcttccctaaagtatgctgatagtagttctcctgggttg
tggcttgctacaaataattgcttttttctcgaagatccaccagacaacaagaaagactca
actggttttgaaagtgttgatgcagaagttaaccatcataacacccagaaagatgagcaa
ccagaagaaagaagccaggaacgaaaagaccagtccttgactgcagatggagtagagata
tcaaatactgatcaaagcaaagaaactcaggattcggtctctggtgaaaagcaacccggt
tctccaactgatgaatcttctagaaatccagatgccctacgagaaaaaagtaagacaagt
ttgttagacaaatcttctgaaaaggagcttctgcgggagaaagactctgaaaaggatgta
aataagctttctggggaaagtaaagagccctgtcaagttacatactcgcaatccgatgta
gatgcttctcaacccgcaaaaacggcaacagatgtagagatggttgatacctttgcttca
tctaaggaaactcatgatacaacagctaaagacatgcaagacgaggttcaagaggctaaa
gagaatacaaaggatgtgcttgttgcgcctaacacatctaatggacagcaacctgttcgg
tcagcttcaccatccacaaacggagcaaccgatgaagattcaaataaagaaggcaagaaa
gagaagcatctttgtgaagttactgaagacaaaagtaacatggggaagctaaagcgtgct
gccgtctctgctctctgtgccgcagcagtgaaggcaaagcatctggcgaaacaagaagaa
gaccaaatccgacaactctctgtgtccttaatagaaaagcagttgcataaactggaaatg
aagctaactgtcttcagtgagatggaaaacctgacaatgagggtacgagagcaactagaa
cgatcaagacaacggctataccacgaaagggcacagataatagccgcacgccttggtgta
ccgcccacatcgtcgtcttcttcaaaagcatcgctaccgaccaatagaatcgccgcaaat
ttcgccaacgtggttccacggcctcctccaataggaatggcctatccgcgtccacctata
ccaagacccatggctacatcggttttggctgggagctcgggtccgcctccgcctccgggt
tcagacaatgtttcttag
DBGET
integrated database retrieval system