Tarenaya hassleriana (spider flower): 104804581
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Entry
104804581 CDS
T04125
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104804581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thj03400
]
104804581
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104804581
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
RT_RNaseH_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
104804581
NCBI-ProteinID:
XP_010527197
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MQRQRSILSFFQKPSPTPACQGSGSGEAAEGGGSQRFPMKKMECEGDVSMLSADRAVTIS
PDEVRGTDTPPEKVPRRVLSSGVTAGEAAGGASSLFSSIMHKFVKVDDRESAGDRCRAAD
VSSDVSSVSLKANGLQECRPNNGQPLERDPVFSFSETADGRSVGDTSVDDDVLGPETPGM
RPILPRLKRVQEDRLMFGDNERSLVASNKRLKLLQDPICEEKGKGNDVDGGSKFEWLDSS
RIKDANGRRPNDPLYDKKTLYIPPDTLQKMSASQKQYWSVKSQYMDVVLFFKVGKFYELY
ELDAEIGHNELDWKMTVSGVGKCRQVGISESGIDDAIQKLVARGYKVGRMEQLETSEQAK
ARGANSIIPRKLVQVVTPSTASEGNIGPDAVHLLAIKEVQVGIENSSTVYGFAFVDCAAL
RFWVGTISDDASCTALGALLMQVSPKEVVYESKGLSREAQKALRKYTLTGSTAVQLTPVL
QITDNMDACEVKNMIQTNSYFRGSSESWNCVLDGLTNCDIALTALRRLISHLSRLKLEDV
LKNGDILPYQVYRSCLRMDGQTMVNLEIFNNNFDGGLSGTLYKYLDNCVTPTGKRLLRRW
ICHPLKDVGSIKNRLDVVEEFLSNSEIMKVSGQYLQKIPDLERLLGRIKASVQSTASLLP
ALLGKKMLKQWLKAFGRLVKGLRSGMDLLLLLQKESHLTSLLCKVCKLPELVGKDGLELF
LSQFEAAIDSDFPNYQNQDMTEENAETLAILIELLIERAAQWSEVIHALSCIDVLRSFAV
TATLSVGSMAKPVIFPESKSTSHDQDRKGPILKIRGLWHPFAVAADGQLPVPNDILLGED
RCSSRHPCSLLLTGPNMGGKSTLLRATCLAVILAQLGCYVPCETCELSLVDTIFTRLGAT
DRIMTGESTFLIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYSVFRHLVEKVQ
CRLLFATHYHPLTKEFSSHPRVTLQHMACAFRSRTGHQSSSSDQELVFLYRLTEGPCPES
YGLQVALMAGIPDRVVETASEAARAMKRLVGENFRTSEQRSEFSSLHEEWLKMLVGISRI
EEDAIEEEDLYVTLLCLWHELKLSCRSHSS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtcagagatcgattttatctttcttccagaagccctcgcctacgccggcgtgt
cagggctcaggttccggcgaggctgccgaaggtggagggtctcagcggtttccgatgaag
aaaatggaatgcgagggcgacgtttcgatgctttctgctgatcgagctgtgacgatttct
ccagatgaggtcagaggaacggatactccgccggagaaggtgccgcgtcgggtcctgtcg
tccggagttactgcgggtgaagccgccggaggtgcatcgtctctgttctcaagcatcatg
cataagtttgtaaaggttgatgatcgagaatctgccggagacaggtgtcgagcagctgat
gtttcttctgatgtttcatctgtatcccttaaggctaatgggctccaagaatgtcgaccc
aataatggtcaacctcttgaacgggaccctgtttttagcttcagcgaaacggcagatgga
agatcagttggagatacgagtgtagatgatgatgttcttggcccagaaacaccagggatg
cgtccaatcctgccacgtctgaagcgggttcaagaggatagattgatgtttggagataat
gagcgttctctagttgcttctaacaaaaggctgaaactgcttcaagatccgatttgtgag
gagaagggaaaaggaaatgatgtagatggaggaagcaagtttgaatggcttgactcttct
cgaatcaaggatgccaacggaagacgacctaatgatcccctttatgacaaaaagactcta
tacataccacctgatactcttcaaaaaatgtctgcctcacagaagcaatattggagcgtc
aagagtcagtatatggatgttgtgcttttctttaaagtggggaagttctatgagctgtat
gagctcgatgcggaaattggtcacaatgagcttgactggaagatgactgtgagtggagtg
ggcaaatgccgacaggtcggtatttctgaaagcgggatcgatgatgcgattcaaaagcta
gtagctcgcgggtacaaagttggacgaatggagcagctcgaaacatctgagcaagcaaaa
gccagaggtgccaatagtataatcccgagaaaattagttcaagttgtaaccccatcaact
gcaagtgagggtaatatcggacccgatgctgtccatcttctagctataaaagaggttcaa
gtggggatagaaaacagttcaacagtgtatggctttgcttttgttgattgtgccgccttg
aggttttgggttggaaccatcagtgatgatgcctcgtgtactgctcttggagctttacta
atgcaggtttctccaaaggaagtggtatatgaaagtaaagggctatcaagagaagcacaa
aaggctcttagaaagtatacattgacagggtctacggcagtgcagttgactccagtcctg
caaattactgataatatggatgcttgtgaagtaaaaaatatgatacagactaacagttac
tttagaggatcttcggaatcatggaactgtgtccttgatggtctaacaaattgtgatatt
gccctaactgctctcagaagattaattagtcatctgtctagattaaagctagaagatgta
ttaaagaatggggatatcctaccataccaagtttacaggagttgtctcagaatggatggt
cagacaatggtaaatctagagatattcaataacaattttgacggcggtctttcagggacc
ttgtacaagtatcttgacaactgtgtaaccccaaccggaaaacgtctcttaagacggtgg
atctgccatccactcaaagatgttgggagcatcaaaaacaggcttgatgtcgttgaagaa
tttctatcaaactcagaaatcatgaaagtaagtggccagtaccttcaaaaaattcccgac
ttggaaaggttgcttggacgcataaaggctagcgttcagtcgacagcttctcttttacct
gctctcttgggaaaaaagatgctgaaacaatggcttaaagcatttggacgacttgttaaa
ggtctccgaagtggaatggatttgttgttgcttctgcagaaggaatcacatctaacaagt
ttactgtgtaaagtctgtaaacttccggaattagttggaaaagacggcctagagttattc
ctttctcaatttgaagcagccatagatagtgactttccaaattatcagaaccaagatatg
acagaggagaatgctgaaactcttgcaatacttatcgagttattgatcgagagagctgct
cagtggtctgaggtcattcatgccctaagctgcattgacgtactgagatctttcgctgtc
actgcaacattatctgtcggaagcatggccaagcctgttattttccccgagtcgaaaagt
acaagtcacgatcaagatagaaaagggcccatacttaaaatccgaggtctatggcatcca
tttgcagttgcggcagatgggcaactgcctgttccaaatgatatactcctgggcgaggac
agatgcagcagtcgtcatccttgctcgttgttgctgacaggaccaaatatgggcgggaaa
tcaacgcttcttcgtgccacttgtctagctgttatccttgcccaactcgggtgttacgtg
ccttgcgagacgtgtgagctgtcactcgtcgacactatcttcacaaggctcggtgccacg
gatagaatcatgacgggggagagtacattcttgatcgagtgcactgaaacagcatctgta
cttcagaatgcaactcaagattcactggttatattagatgagctaggtagaggaacaagc
actttcgatggatacgccattgcatactctgttttccgtcaccttgtggagaaagtccag
tgcaggttgctctttgcgacgcattaccatccgctcacaaaggagttctcgtctcatcct
cgggtgacgttacaacacatggcttgtgctttcagatcaagaaccgggcatcaatcttcg
agctccgaccaagaactggtgttcctgtaccgactaaccgaaggaccttgtcccgagagc
tacggtctccaggtcgccctcatggcggggattcccgaccgagtagtggaaacagcttca
gaggcggctcgtgccatgaagagattggtcggagaaaatttcaggacaagtgagcagagg
tcggaattctcgagtctgcacgaagaatggctgaagatgttggtaggaatttctcgtatc
gaagaggatgccatcgaggaagaagatctctatgtcacgttgctttgcttgtggcatgaa
ctcaaactctcctgcagaagccattcgagttaa
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