Tarenaya hassleriana (spider flower): 104804633
Help
Entry
104804633 CDS
T04125
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03030
DNA replication
thj03420
Nucleotide excision repair
thj03430
Mismatch repair
thj03440
Homologous recombination
thj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104804633
03420 Nucleotide excision repair
104804633
03430 Mismatch repair
104804633
03440 Homologous recombination
104804633
03460 Fanconi anemia pathway
104804633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thj03000
]
104804633
03032 DNA replication proteins [BR:
thj03032
]
104804633
03400 DNA repair and recombination proteins [BR:
thj03400
]
104804633
Transcription factors [BR:
thj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104804633
DNA replication proteins [BR:
thj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104804633
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104804633
MMR (mismatch excision repair)
104804633
DSBR (double strand breaks repair)
HR (homologous recombination)
104804633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
Rep-A_N
Motif
Other DBs
NCBI-GeneID:
104804633
NCBI-ProteinID:
XP_010527273
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MRVKAIFPGTLTSDIISGKIQNLGLIRLLDYTVNDIPSKSEKYLLVTKCEAVASALESEI
KANIKTEDTSVTLKPKQEADASNGMNLLKPKQKFVAKSASQIINEQRGNGAPAARMAMTR
RVHPLVSLNPYQGNWTIKVRVTNKGVMRTYRNARGEGCVFNVELTDEEGTQIQATMFNEA
ARKFYDRFQLGKVYYISRGVLKLANKQFKTVPNDYEMTLNENADVEEASNEETFIPETKF
NFVPIDELGAYINQKELVDVIGVVQSVSPTMSIRRRNDNEMIPKRDITVADESKKTVVVS
LWNDLATGLGQELLDMADKSPVVAIKSLKVGDFQGVSLSTIRRSNVVVNPDLPEAKKLKS
WYDSEGKEVSMSAIGSGMSPSAKNGSRSMYSDRVPLSHVISNPSLGEEKPVFFSIRAYIS
FIKPEQTMWYRACKTCNKKVTEAFGSGYWCEGCQKTDEECNLRYIMVVKASDSTGEAWLS
TFNEEAERIIGRPAEELNKLKSEEGEVNEFQTKLKEATWASHVFRVSVSQHEYNSEKRQR
ITVKSVAPVDFAAETRLLLEDISKNKTSQQF
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagggttaaggcaattttcccagggactttgacttctgatataatctcaggcaagatc
cagaacctgggtctaattcgtctgcttgattataccgtcaatgatatcccaagcaaatcg
gagaaatatttgcttgtgacaaaatgcgaggcagttgcttcagccctcgaatcagagatt
aaggccaacatcaagactgaggacaccagtgtaaccttaaagccaaagcaagaggctgat
gcatcaaatgggatgaatttgttgaagccaaagcaaaaatttgttgctaaatcagcctct
cagattatcaatgaacaacgtggaaatggggcaccggctgcaagaatggccatgacaagg
agggttcatccgcttgtttcgttgaacccttaccaaggaaactggaccattaaagtccga
gtcacaaacaaaggagtcatgagaacttacagaaacgccagaggagagggatgcgtcttt
aatgttgaactaaccgatgaagaaggaacccaaattcaggctaccatgttcaatgaagca
gcaaggaagttttatgacagatttcagttgggaaaggtctattacatttcaaggggcgtg
cttaaacttgctaataagcagttcaagacagttccgaacgattatgagatgactctgaat
gagaatgctgacgttgaggaagctagtaatgaagaaacgtttatacctgagacaaaattc
aattttgtgcccattgatgagttgggtgcatacataaatcagaaggagcttgttgatgtc
attggtgttgttcaaagtgtttctccaacaatgagtattaggaggaggaatgacaatgag
atgattcccaagagggatataactgtggctgatgaatcaaagaaaacagttgttgtttcc
ctctggaatgacctggccactggcttaggacaagaacttctggacatggctgacaaatca
ccagtagttgcgatcaagtccctcaaagtaggagatttccaaggcgtttcattgtccaca
atcagaagaagcaatgtggtggtcaatcctgatctaccagaagctaagaagttgaaatct
tggtatgattctgaaggaaaggaagtatccatgtccgccattggctctggtatgagccct
tctgccaaaaatggatcaagatctatgtactctgaccgagttcctctttctcacgtcatc
agcaacccatctctaggagaggagaagcctgtatttttcagcattagagcttacataagc
ttcatcaagcctgaacagacaatgtggtatcgtgcttgcaaaacctgtaacaagaaagta
acagaggcgtttggctctggttactggtgtgaaggttgtcagaaaactgacgaggaatgt
aacttaagatacataatggtcgtgaaagcttctgattcaacgggtgaagcttggttgtct
acgttcaatgaagaagcagagaggattattggtcgcccagccgaggagctcaacaaacta
aaatctgaggaaggggaagttaatgagtttcagacaaaactgaaagaggctacctgggca
tctcatgtcttccgtgtcagtgtctcccaacacgagtataacagcgagaagaggcagagg
ataaccgtaaaaagtgtagctccagttgattttgctgctgaaacaagactcctgcttgaa
gacatctccaagaacaagacttctcagcagttctag
DBGET
integrated database retrieval system
