Tarenaya hassleriana (spider flower): 104804988
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Entry
104804988 CDS
T04125
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104804988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thj03021
]
104804988
03036 Chromosome and associated proteins [BR:
thj03036
]
104804988
Transcription machinery [BR:
thj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104804988
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104804988
PBAF complex
104804988
GBAF(ncBAF) complex
104804988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
CLP1_P
SANT_DAMP1_like
DUF3306
DUF7685
Motif
Other DBs
NCBI-GeneID:
104804988
NCBI-ProteinID:
XP_010527681
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MPASEERRGRWKRRRRGGLAARKPKQEEDDVEDEEEENNNDEAEDVDNAAEELQQNGGGG
ATSDRGPGQGEVLEESGARLSDFPTVVRHVVVRPHPSVTAIAAAERAGLVGETKGHGSLP
ALENVSYGQLQALSSVPADSPGLDPEREDGSYVISPPPIMEGEGVIKRFGDRVHVMPMHS
DWFAPLTVNRLERQVVPHFFSGKSPKHTPEKYMEFRNSIVAKYMSNPEKRLVMSDCDGLV
DGVSNEDLARVFRFLDNWGIINYCADAESNPESSSDVPCVMEDPNGEVHVLSAALKSMDS
LIKFDKPKCRHKAAEVYPSLSCHDDEPSDLDSRIREHLCEIHCSHCSRPQPTMYFQSQKK
GDALLCANCFHHGRFVIGHSSIDFIKVGPAKEYVETDGDNWTDQETLLLLEAVELYHENW
VEIAEHVGSKSKAQCILHFLRLHVEDGLLDNVEVPGVTKSAHSANGYDQRGTDSNGDLPG
PSGQDLDLDISLPFAKSPNPVMALVAFLASAVGPRVAASCAHASLAALSEDDRMNPEGVQ
GRESSLPLGEHQQNDENARAQATPLSCQNGAETTLLPLPRDKIMLAVR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctgaagagaggcgcgggagatggaagcggaggcggcgaggcggattggcg
gcgaggaagccaaagcaggaggaggacgatgtggaagacgaagaggaagagaataacaac
gatgaggccgaagacgtcgacaatgcggcggaggagctgcagcagaacggcggcggtggt
gcgacgtcggatcggggccccggccagggcgaggtgctcgaggaaagtggtgcccgtctc
tccgacttccccacggtggtaaggcacgttgtggtacggccgcatccgtctgttacagcg
attgcggcggcggagagggctggtttggttggggagaccaaagggcacggttctctcccg
gctttggagaatgtttcttacggacagcttcaggcgttgtcttctgtgccggcagactct
cctggacttgatcctgaaagggaggatgggtcttatgttatctctccccctcctatcatg
gaaggagaaggagttattaagcggttcggggatcgtgttcatgtcatgcctatgcattcg
gattggtttgcacccctcactgtgaatcggcttgagaggcaagtggtgccacatttcttc
tctggaaaatcgccaaagcatacaccagaaaaatatatggaattcagaaactccattgtt
gcaaaatatatgagcaatcccgaaaagagactcgtgatgtctgattgcgacggattggta
gacggtgttagtaatgaggatttagcacgggttttccgatttcttgataactgggggata
atcaattactgtgcagatgctgagagtaatcctgaatcttctagtgatgtaccgtgtgtt
atggaggacccaaatggtgaggttcatgtgctgtctgctgctctaaaatcaatggacagt
ttgatcaaattcgacaaacccaaatgtagacacaaggcggctgaggtctatccatccttg
tcatgtcatgatgacgaaccctctgatttggacagcaggattcgtgagcacctatgtgaa
atccattgcagtcattgttctcggccacaaccaaccatgtatttccaatcgcagaagaag
ggggatgcactcttatgcgccaattgttttcaccacggaagatttgttattggacattct
agtattgattttataaaggtagggccagccaaagaatatgtcgaaacagatggagataat
tggactgatcaagaaactctcttgcttctcgaagccgtggaactctatcatgaaaattgg
gttgagattgcggagcatgttgggtccaaatcgaaagctcaatgcatccttcattttctc
cgattacatgtggaggatggtcttttggacaatgttgaggttccaggtgtaaccaaatca
gcacattcggcaaatgggtatgaccaaagaggaacagactcaaatggggatctaccagga
ccatctggtcaggatttggatctggacatcagtcttccttttgcaaagtctccaaaccca
gttatggcattggttgcctttctggcatcagctgttggtcctcgagttgctgcatcatgt
gcccatgcttccctggcggcattgtccgaggatgatagaatgaatcccgagggggtgcaa
ggtagagaatccagcctgcctcttggagaacatcagcagaatgatgaaaacgcaagagcg
caagcgacgccattatcatgtcaaaacggagcagagacaactctgctgccacttccacgg
gataagattatgctggcggttaga
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