Tarenaya hassleriana (spider flower): 104805082
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Entry
104805082 CDS
T04125
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104805082
Spliceosome [BR:
thj03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
104805082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
RMMBL
Lactamase_B_6
Lactamase_B
Lactamase_B_2
EFR3
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
104805082
NCBI-ProteinID:
XP_010527803
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MTIDCLVLGAGQEVGKSCVIVTINGKRIMFDCGMHMGYDDHRRFPDFSLLSKTGDFDNAL
SCIVITHFHLDHVGALPYFTEVRGYKGPVYMSYPTKALAPLMLEDYRRVMVDRRGEEELF
TTDHITNCMKKVIALDLKQTVQVDQDLQIRAYYAGHVLGAVMIYAKVGDAAIVYTGDYNM
TPDRHLGAAKIDRLHLDLLITESTYATTVRDSKYAREREFLQAVHKCVAGGGKALIPSFA
LGRAQELCMLLDDYWERMNIKVPIYFSAGLTIQANMYYKMLLSWTSQKVKEKCAGHNPFD
FKNVRDFERSFIHAPGPCVLFATPGMLSGGFSLEVFKHWAPSPSNLIALPGYCVAGTIGH
KLMSGKPTKINLDKDTQIDVRCQIHQVSFSPHTDAKGIMDLTKFLSPRHAVLVHGEKPSM
MSLKEKISSELGIPCYVPAIGETVSVPSTHYIRANASDMFLRHCSTPNFRFSNSTQLRVI
DQRVADSVLMVENNKKAKIVHQDEVSEMLQEKNHAVTLALCFPLNVKGITDLDLIKRLSE
KISETLSGSEIQESGNCLQVGSFRASVCPNENCSHRRGVRSSESVFLCCSWSVSDLELGW
QIISAIKHNP
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgattgtctcgttctcggtgctgggcaagaagtagggaagagctgcgtgatc
gtcaccatcaacgggaaaaggataatgtttgattgtgggatgcacatgggctacgatgat
catcggagattcccagatttttctctcctctcgaaaaccggcgatttcgataacgcgctc
tcttgtatcgtcatcacccactttcatttggatcatgttggtgcgctgccttacttcacg
gaggtgcgcggatataaagggcctgtatacatgtcgtaccccacgaaggcattggctcca
ctgatgcttgaggattacaggagagtgatggtggatcgaaggggcgaagaagagctattc
accaccgaccatatcacgaattgcatgaagaaagttattgcattggatctgaagcaaaca
gttcaggttgatcaagatcttcaaatccgtgcctattatgctgggcatgtccttggagct
gtgatgatttatgcaaaggtgggtgatgcggcgattgtgtacactggagattataatatg
actccagatagacatctaggagcagctaaaattgacagactccatttagatcttctcata
acagagtccacatatgcaactactgttcgagattcaaaatatgcacgggagagagagttt
ttgcaagccgttcataaatgtgttgccggtggaggaaaggcgctgattccctcatttgct
cttggaagggcccaggagctctgtatgttgctggatgattactgggagcgtatgaacata
aaggttccaatatacttctcagcaggtttgaccatccaagcgaatatgtattacaaaatg
ctcctcagctggactagccagaaggttaaggagaagtgcgctgggcataatccatttgat
tttaagaatgttagggattttgagcgttcttttatacatgctcctggtccatgtgttctt
tttgctacacctgggatgctcagtggcggcttctcgcttgaagtgttcaagcactgggct
ccttctccatcaaacctcattgccttgcctggatattgcgtggctggtactattggtcat
aagttaatgtccggtaaacccacaaagatcaatctcgataaagatacccagattgatgtc
cgttgccagatacaccaagtgtctttcagtcctcacacggacgcaaaaggaatcatggat
ctgaccaagttcctctcgccaaggcatgctgtactcgtgcatggagagaagcccagcatg
atgtccctcaaggagaagatctcctctgagcttggaatcccctgttacgtccctgcaatc
ggcgaaacggtttcagtcccttccacgcattacatcagagcaaatgcttctgacatgttc
ctcagacactgctccacccctaacttcaggttctctaactctactcagctgcgtgtcatc
gaccagagagttgccgattcggttttaatggtagagaataacaaaaaggcgaagattgtt
caccaagacgaggtctctgagatgttgcaggagaagaaccatgcagtgactctggcttta
tgttttccacttaacgtgaaggggatcacggatcttgatctgatcaaacggctgtctgag
aagatctcggagacactatctggatctgagatccaagaatctgggaactgtttgcaagtt
ggatctttcagagcctcagtgtgtccgaacgagaactgctcgcatagaagaggggtaagg
tctagtgagtctgtgttcttgtgctgcagttggtctgtttcagatttggagcttggttgg
caaatcatcagtgcaataaaacacaacccttga
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