Tarenaya hassleriana (spider flower): 104805355
Help
Entry
104805355 CDS
T04125
Name
(RefSeq) putative pectate lyase 11
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj00040
Pentose and glucuronate interconversions
thj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104805355
Enzymes [BR:
thj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104805355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104805355
NCBI-ProteinID:
XP_010528200
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MRFPSQTFSFSPQKSRKKKSKILDFFYTMFMFTPLNIFFVCVFLFHLAVVSAVSGSLSHV
RDPDLVVDEVQRSIFNASRRSLSYLSCGTGNPIDDCWRCDPNWENNRQRLADCAIGFGKN
AMGGRDGRIYVVTDPGDDDPVNPRPGTLRYAVVQEEPLWIIFKRDMVIRLKKELIISSFK
TLDGRGASVHITDGPCIKIHYASNIIIHGIHIHDCKRAGGGMIRDGPHHTGWWIPSDGDA
VAIFGGRHIWVDHCSLSNCEDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDTFTQDKN
MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPN
ERFRKEVTKHEDAPENEWRNWNWRSEGDLLLNGAYFRQSGAGAPSTYARASSLSARPSTL
VGPMTTAAGALNCRRGRRC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagattcccatcccaaacattttcattttccccccaaaaatcacgaaaaaaaaaatcc
aaaatactcgattttttttatacaatgtttatgtttactcctttgaatattttcttcgtt
tgcgtatttttatttcatctcgccgtcgtttctgccgtatcgggctcgttatcgcatgtt
cgtgacccggacctggttgtcgacgaggtccagaggagcatattcaatgcgtcgaggagg
agcttatcatacctttcgtgcggaaccggaaaccctatcgacgattgctggaggtgcgac
cctaattgggagaataatcgtcagcggttagccgactgcgccatcggcttcgggaaaaat
gcgatgggaggccgagatggtcggatctacgtggtgaccgatcccggagacgacgatccc
gttaaccctagacccggaactctaagatatgcagtggtgcaagaggaaccgttgtggatc
attttcaagagagatatggtcataaggctcaagaaagaactcatcatatcctctttcaag
accttggacggtagaggagcgagtgttcacataaccgatgggccatgcataaagatacat
tacgcatcgaacatcatcatccatggcatccacatacatgactgcaaacgcgcgggaggt
ggcatgatccgggacggtccacatcacactgggtggtggatcccatccgacggcgatgcg
gtggcgatattcggagggcgacacatatgggtcgatcattgctcgttgtcgaattgcgag
gatggtctcatagatgccatacatggatcgacggccataaccatatcgaacaattacatg
acgcatcatgataaggttatgttgttaggtcacagtgacactttcacgcaggacaagaac
atgcaggtcactattgcgtttaaccattttggcgagggattggtccagagaatgccacga
tgtcgacatggatatttccatgtggtgaacaatgactacactcactgggaaatgtatgca
atcggcggcagcgcttctccgacaatatacagccaaggcaacagatttctcgctcccaat
gaaagattcaggaaagaggtgacgaaacatgaagacgctcccgagaacgagtggagaaat
tggaactggagatcggaaggagatttacttctcaacggggcatatttccggcagtccggc
gccggagcaccgtccacatacgctagggcctcgagcctaagtgcgaggccgtcaaccctg
gtgggtcccatgacgacagccgccggcgcccttaactgccggagaggccgtcgttgttaa
DBGET
integrated database retrieval system