Tarenaya hassleriana (spider flower): 104805377
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Entry
104805377 CDS
T04125
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
thj01009
]
104805377
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104805377
03041 Spliceosome [BR:
thj03041
]
104805377
Protein phosphatases and associated proteins [BR:
thj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104805377
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104805377
Spliceosome [BR:
thj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104805377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
Nsp1_C
DUF2935
Motif
Other DBs
NCBI-GeneID:
104805377
NCBI-ProteinID:
XP_010528233
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MEVSVSSQKQSVISPPECMSDPEEQEISEEEDDDRNHKHRRRETRSQSLERDSSDQVVFT
RPYRKNNIHFENGNSFNQHQKRHPGAANVRFDSNQRIRSNHTFSRDTGPGRGGGRGYGSW
AQRDSRFNPVDLSSHMVQVGSMTPGFFGGRGLSGVSTAQNSPWPAFGMLPGVPTGGLDTL
HPIGLQGSLRPPLNSQLNLGIQQRCRDFEERGFCLRGDMCLMEHGVNRIVVDDVQSLSQF
NLPVSLPGAPLLAAPSKAVPTHFGSSSAFMSAKGANGKNNESGMTVDGLGYGDPYPAAAG
TDFYDPDQPLWNNSTGETSGAISGRNPNGIDETVATLDCDNQDVAENACGIRNSRSTRKS
VWGQICGSNSQGNFKEKGNSALNSSIGLEDEVKEVSISSSRQGKRNLAGETVAKFDSSKA
PNDATTNTRKHGQKAMRTLFVNGVPGESNKRDLLLAHFQKFGNVIDIRIPLNSERAFVQF
SKREEAEAALKAPDAVMGNRFIKLWWANWDSIQDNGPNTGNGASLTRRGMISAGGQNKFP
ITPTSTSNHASTGPKGPGEAPSSCEQPKLVVSNGPKVPPLQKKSEALEQLKEELRKKQEM
LEQKRNEFRKQLAKFEKQATVIKDDEAEEQSVKRLKTGTPADLSAASPPTKPKLESLTEK
SKLAQNPMSNFKLNTETWLQEPKNSKPQTYPFAASMNTPMVNRYKLDNRTTTIKVAPPLP
TGLADVDVLKEYFSSFGEVSKVEIEDEGPSGDNTKEGDDTSNENLTAHVTFAKRSAAEKA
FANAKCWQGHVLRFVWVTTRQTGKEDNPSVSNSDKSSSVHSDPKAVESSPVSNIKESSVG
TSDDKNVVSGDDASEKQEKEGIEIETSELMEASEATGMEEEQQPLGSNLDG
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttctgtttcctctcagaaacaaagcgtgatatcccctcccgagtgtatgagt
gatcccgaggagcaggaaatcagcgaggaggaggatgatgatcgcaaccataagcatcgt
aggagagagacaaggtctcagtccttggaacgagatagttcagatcaagttgttttcaca
aggccttacaggaaaaacaatatacattttgaaaatgggaattcttttaatcaacatcaa
aaacgacatccaggtgcagcaaatgttcggtttgattcaaaccaaagaataagatcaaac
catactttttcaagggacactggtcctggtagaggtggagggagaggctatggttcctgg
gcacagcgtgattccaggttcaaccctgttgatctctcatctcatatggtccaagttggg
tctatgactccgggattttttggaggaagagggttatctggtgtttcaaccgcacaaaat
tcaccatggcctgcttttggaatgcttcctggggttccaactggtggcctagatactctc
catccaattggcttgcaagggtctctaagaccgcccttaaattctcaactcaaccttggt
attcaacaacggtgtagagactttgaggagcgtggattctgtctaagaggagacatgtgt
ctcatggagcatggagtcaatcgcattgtcgttgatgatgttcagagtctttcccaattc
aatcttcctgtttcgctccctggcgcacctcttctggcagctccatctaaagcagtgccc
acacattttggcagctcttctgcatttatgagtgctaaaggggctaatggaaaaaataat
gagtctggaatgactgttgatggtttgggttatggggatccatatcccgccgctgctgga
actgatttttatgaccctgatcaacctttatggaacaacagcactggtgaaacttcaggt
gcaatatctggccgaaatccaaatggcattgatgaaactgtagctacactggattgcgat
aaccaagatgtagctgaaaatgcgtgtggtataagaaactctaggagcactaggaaatct
gtttggggtcaaatctgtggttcaaacagtcaagggaatttcaaagagaaaggtaactca
gcattgaattcatcgattggtcttgaagatgaagtcaaggaggtctctatcagttcatca
aggcaaggaaagcggaatcttgctggtgaaacagttgccaaatttgattcatcaaaggca
cctaacgatgcgacaaccaatacaagaaaacatggtcaaaaggccatgcgaacactattt
gtcaatggggttcccggggagagcaacaagagggaccttcttcttgcccattttcagaaa
tttgggaatgttattgacattcgtatccccttaaacagtgagcgagcatttgttcagttc
tctaagcgtgaagaggctgaagctgctctcaaggcacctgatgctgtaatgggtaaccgc
tttatcaaactttggtgggcaaattgggatagtatccaagataatggcccgaacactgga
aatggtgcatctctgactcgccgtggtatgatatctgccggaggacaaaacaaatttcct
attactccaacatcaacgagcaaccatgcatctacaggtccgaagggtcctggggaagct
ccatcctcctgtgagcagcctaagctggtggtcagtaatggtcctaaggtgccacctctg
cagaaaaaatcagaagctctcgagcagctgaaggaggaacttcggaaaaagcaggaaatg
ctggagcagaagcgtaatgaattccgcaaacagttggccaaattcgaaaaacaagctacc
gtcatcaaggatgacgaagctgaggagcagtctgttaagcgccttaaaacgggtacccct
gctgacctgagtgctgcctctcccccgacaaagccgaaactggagtctctaacagagaag
agtaaacttgcccagaatccgatgtccaactttaagctaaacacagaaacatggttgcaa
gaaccgaaaaactcgaaaccacaaacttatccctttgcagcaagtatgaacactcctatg
gtgaataggtataagttggacaatcgcaccactaccatcaaagttgctccccctttacct
actgggttagctgacgtcgatgtcttaaaagaatacttctcttcctttggggaagttagc
aaagtggagatagaagatgaagggcccagtggcgataataccaaagaaggggatgataca
tctaacgaaaaccttacagcacatgttacctttgcgaaacgcagtgcggccgagaaggcg
tttgccaatgcaaagtgttggcaaggacacgtcttgcggttcgtgtgggtaacaacacga
caaaccggcaaagaggataatccctctgtatccaactcagacaagtcatcttctgttcat
agtgacccaaaagctgtagaatcgtctccggtctccaacattaaagaatcttccgtggga
acttctgacgataagaatgttgtttccggggacgatgcttctgagaaacaagagaaggaa
ggaatcgagatagagacctccgagctgatggaagcttctgaggccacgggaatggaggaa
gagcaacagccgttaggatcaaatcttgacggatga
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