Tarenaya hassleriana (spider flower): 104805379
Help
Entry
104805379 CDS
T04125
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X2
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thj03036
]
104805379
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104805379
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104805379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Cdd1
DNA_pol_lambd_f
AAA_22
Helicase_dom4_arc
Motif
Other DBs
NCBI-GeneID:
104805379
NCBI-ProteinID:
XP_010528238
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MDTDTLKSVSDLPVPFRSAFSFRYFNSLQSECFPLCFHSDTNMVISAPTGSGKTVLFELC
ILRLLSKSISKEGRFYHAKGTLKTVYISPSKALVQEKLRDWSQKFNSWGINCLELTGDNE
TYNIRNIQEADIILTTPEKFDAVSRYRVTSGGLGFFSDIALLLIDEVHLLNDPRGAALEA
IVSRIKILSSSPELRSSPLANVRLLAVSATIPNIEDLAEWLKVPAPGVKRFGEEMRPVKL
TTKVFGYAAAKNDFLFEKRLQNYIYDILMQYSKGKSALVFCSTRKGAQEAAQLLAQVAMT
YGYSNPFIKSKEQLDRLREASLACGDKQMQSYILLGVGYHNGGLSQKDRSLVEGLFLCGD
VQVLCTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYMEYDRSMILQMCGRAGRPPFDDTG
MVIIMTRRETVHLYENLLSGCEIVESQLLPCLTEHLTAEIVQLTISDITRAIEWMKCSYL
YVRMKKNPENYAIRKGIPKDRVEKHLQEVCVQKISELSRYQMIWTDSDGFVLKPQEPGRL
MTKYYLKFNTMKYIMHAPAVCSLEEALHVVCRAEEISWIQLRRNEKKTLNDINMDKEGRL
RFHVNDNKGKRKKRIQTREEKVFVLVNDWLTGDPSAHDLSMTQDANSICSNGCRIARCMK
EYFVYKKNYKGFLSSTLLTKSLYQKLWDDSPYLLKQLLGIGMVTAKALHSMGVRSFEALA
EADPRRIEIVTGRKYPFGNHIKESLSSLPPKVDITVREVECQKQGISKIAVTLTRLSEPL
QSTKRHYADMIVGTEEENLIHFHEKIRMDDFSSPYSTTILLERPQQAKVTVKVDLIFEEY
IGLDLHETLVLKKCNSAKVNYERRTSLPRRHPSSDVCKVEKDNKIESSMSAQKDQNTSMP
TFKLIDEDSGEENEPHISMEEDDCMIINERTVFDHIREKAKRFPSLSTWNPASPTPEKPT
RKRNSLRGEFPELSAEFHASQETPRNQIPQDPMLRTDAKDDEQNINPAENQGETQRPFSG
ETIFDHIRKKSKNFPVLNASKIDHPQNFLPRSNHSGIEHLNADPIIISCLEGGNAEAISS
ENCSRAYGMLSPSLKRASVALDPSPVEMLSFDISMMKRNTKQEEELGSSQFNTMKRKGLC
SLVPGKSDDSDSFLGFKSIFSFL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacacactgaaatctgtctcagatttgcctgtaccattccgttcagctttt
agtttcaggtacttcaactcgctgcagagtgagtgctttccactgtgcttccactcggat
acaaacatggtaatttcagcaccaactggaagcggtaaaactgtgcttttcgaactttgc
attttgaggcttctctccaagtctatctccaaggaaggaaggttttaccatgctaaagga
actcttaaaacagtttacatatccccatccaaggctttagtacaagagaagttacgggac
tggagccagaagtttaattcgtggggcattaattgtctggagttgacaggtgacaatgaa
acctacaacataaggaatatacaagaggcagatattattttgactacacctgagaaattt
gatgcagtgagtcggtatcgtgtaaccagtggaggcttaggctttttcagtgatatagct
cttctgcttattgatgaagttcacctgctcaatgatccacgtggagctgctcttgaggca
attgtcagtagaataaagattctttctagtagtcctgaactgagatcaagtcctttggcc
aatgtacgtcttctggctgtatcagctacaattccaaatatcgaggatctagcggagtgg
ctcaaggttcctgccccaggtgttaagaggttcggcgaagaaatgagacctgtaaagttg
acgactaaagtttttggctatgcagctgcgaagaacgactttctctttgaaaagcgcctc
caaaactatatctacgacattttgatgcaatactcaaaaggaaaatcagccttagttttc
tgttcgacacgaaaaggagcacaagaggcagcacagctacttgctcaggttgcaatgact
tatgggtactcaaacccatttatcaaaagcaaagaacagcttgaccgactaagagaagct
tcactggcatgtggtgacaaacaaatgcaatcttatattctccttggtgttggttatcac
aatggtggcctttcgcaaaaggatcggagtcttgtagagggactcttcctttgtggagac
gtccaagttctttgcaccaccaacactcttgctcatggaatcaacttgcctgcacataca
gtcatcataaaatcaacacaacattttaacaaagaaaaaggtctgtatatggagtatgat
agatccatgatactgcagatgtgcggcagggcaggaagaccgccctttgatgatacagga
atggttataattatgactagaagagaaacagttcatctgtatgagaatctcttgagtgga
tgtgaaatagttgaatcgcaattgcttccatgcttaacggagcacctaacggcagaaata
gttcagcttactatctccgatattacacgggcaattgagtggatgaagtgctcctacttg
tacgtgagaatgaaaaagaacccagagaactatgctattaggaaaggaattccaaaagat
cgagtagagaagcatttgcaagaggtttgcgttcagaagatcagcgagttgtcacgctat
cagatgatctggactgactcagatggttttgttttgaaaccacaagaaccaggacggtta
atgacaaagtactatctaaaattcaacacaatgaagtacattatgcatgcgccagcagtc
tgcagtttggaagaagctcttcatgttgtatgccgtgccgaggagatttcttggatacaa
ctcagacgcaacgagaagaagaccttaaacgatataaacatggacaaggaagggcgactg
agattccacgtcaatgataataaaggaaagcgaaagaaacgcatccaaacaagggaagag
aaagtatttgtgctggtgaatgattggttgactggggatccttcagcacatgatttatct
atgactcaggatgcgaactcgatatgttcgaatggatgcagaattgctagatgcatgaag
gagtactttgtatacaaaaagaattacaagggttttttaagttcaacccttctaaccaaa
tcgctctatcaaaagctttgggatgacagtccatatttgctgaaacaattgcttggcatt
gggatggttacagcaaaggcacttcactcaatgggagtcagatcatttgaagcacttgct
gaagctgatccaaggaggatagagattgtcactggtcggaaatatccttttgggaatcac
atcaaggagtccctatcgtcgcttccaccaaaagtagacataacggtcagagaagttgaa
tgccagaagcaaggcatatcgaaaatagcagtcacgttgacaaggctgtcagagcctctc
caatccacaaaacgacactatgctgatatgattgttggtacagaggaagaaaacctcatc
cattttcacgagaaaataagaatggatgatttctccagcccctatagcacaaccatactc
cttgaaaggcctcaacaagcaaaagtgaccgtgaaggttgacctcatatttgaggaatac
attggtcttgatctccatgagacacttgttctgaagaagtgcaacagcgcaaaagtaaat
tatgaacgccggaccagtttaccccgacgtcatccctcttcggatgtgtgcaaagtagag
aaggataacaaaattgaatcaagcatgtcggcccagaaggatcagaacacctccatgcct
actttcaaacttatagatgaagattcaggagaagagaatgagcctcatatttcaatggaa
gaagatgattgcatgatcatcaacgaacgtacagtctttgaccacatacgtgaaaaggca
aagcgctttccctcattgagcacttggaatcccgcctctccaacaccagaaaaaccaact
cggaaaagaaatagcttacggggggaatttcctgaactcagtgctgaattccatgcttct
caagaaacaccgagaaatcaaattccgcaagatcctatgttgcgtacagatgctaaagac
gatgaacaaaatataaaccctgcggagaaccaaggtgaaacgcaaaggccattctcgggt
gaaacaatattcgatcacattcggaaaaagtcaaagaatttcccggtgctcaacgcatcg
aagatcgaccatccacagaacttcctccctcgaagcaatcactcaggtatcgaacaccta
aacgcagatcctataatcatttcttgtctagaaggtgggaacgcagaggccatttcctca
gagaattgcagtagagcgtacggaatgcttagcccttctctgaaaagggcaagcgtcgct
cttgatccgtcacccgtggaaatgctgtcctttgatatttcaatgatgaagagaaacacc
aagcaggaggaggagcttgggtcatctcagttcaataccatgaagcgtaaaggcctttgc
tcgttggtcccaggtaagtccgacgactctgattcttttcttggattcaagagcatcttc
tcgttcctttga
DBGET
integrated database retrieval system
