Tarenaya hassleriana (spider flower): 104805690
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Entry
104805690 CDS
T04125
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thj03021
]
104805690
03036 Chromosome and associated proteins [BR:
thj03036
]
104805690
Transcription machinery [BR:
thj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104805690
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104805690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HHH_9
Spt6_S1
HTH_44
Tex_central_region
SH2
Tex_N
HHH_3
Tex_YqgF
MRP-S34
Motif
Other DBs
NCBI-GeneID:
104805690
NCBI-ProteinID:
XP_010528633
LinkDB
All DBs
Position
Unknown
AA seq
1634 aa
AA seq
DB search
MARNAVYDDEDDAELEDEEGEPVHGDPVEGRGDDEDEDEEEGQDEYEDDGFIVDDVDEEE
EEQEEEEEEEKQDSDEERQKKKKKRRKKDDDLDEDDYLLLQDNNINIQKKKYKRLKKARR
ESEGGMGLSDDEFDGSGLGGRTAEEKIKDRLFDDDDGGPLEDVGDEEELVEEEDIEIGDD
DEMADFIVEEDELDEHGAPVRRKKVRKKSRQAPGVSSSALQEAADIFGDVEELLKLRKKG
LASNERMERRLEDEFEPTVLSEKYMTEKDDEIRILDIPERMQISEESTGSPPIDEISIEE
ESNWIYAQLSTLLKGPDQQGLHAFEGQDVSINKDDITRFLELHHVQKLEIPFIAMYRKEQ
CRSLLDGADFGDVNADKKPEVKWHKVFWTIQDLDRKWLLLQKRKAALHGYYTKRFEEESR
RIYDETRLNLNQHLFESIIKSLKAAETEREVDDVDSKFNLHFPPGEIDVDEGQYKRPKRK
SLYSICSKAGLWEVANKFGYSAEQLGLALSLEKLVDELEDAKETPEDMASNFVCAMFENP
LAVLKGARHMAAIEISCEPSVKKYVRGIYMENAVISTSPTQDGNVVIDTFHQFSGVKWLR
EKPLSKFQDAQWLLIQKAEEEKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNE
QRKLILEDALHNFLLPSMEKEARSLLSSRSKSWLLSEYGQALWNKVSAGPYQKKDMDIGS
DDDAVPRVMACCWGPGKPANTFVMLDSSGEVLDVLYAGSLTLRSQNVNDQQRKKNDQDRV
LKFMMDHQPHVVALGAVNLNCTRLKDDIYEVIFKMVEENPRDVGHEMDELSCVYVDEALP
RLYENSRISAEQLPQQSGIVKRAVALGRYLQNPLATVATLCGPGREILSWKLHALENFLS
PDEKYGMVENVMVDVTNQVGIDVNLAASHEWLFAPLQFISGLGPRKAASLQRSLVRAGSI
FVRKDLISHGLGKKVFVNAAGFLRIRRSGLAASSSQFLDLLDDTRIHPESYGLAQELARD
IYEEDVKGDSNDDEDAVEMAIEHVRDRPSLLRSVDLKEYLETKKRENKKETYNDIMRELI
NGFQDWRKPFKDPSPDEEFYMLSGESEETIAEGRIVQATVRRIQGGRAICVLDSGLTGML
MKEDYTDDWRDIVELSDRLHEGDMLTCKIKSLQKNRYQVFLVCKESEMRINRHQHVQNFD
PYYHEDQSSLQNDKVKAQKEKELGRKHFKPRMIVHPRFQNITADEAMEYLSDKDFGESIV
RPSSRGPNYLTLTLKIYDGVYAHKDIAEGGKENKDITSLLRIGKTLKIGEDTFEDLDEVM
DRYVDPLVAHLKAMLNYRKFRRGTKTEVDELLRIEKAENPSRIVYSFGISHEHPGTFILT
YIRSTNPHHEYIGLYPKGFKFRKRMFEDLDRLVAYFQRHIDDPMHEPSIRSVAARVPMRS
PAERGSSAGGGWGGSSHSEGGWKGHSFDRDHSSTPGSRSGRGGDFRNSGGGGRDGHPSGA
PRPYGGGRGRGRGRRDNMNNERQDSGFDTPKWGSSSKDGNDDWGNNNSGTGGGGGWGSDT
GGGKKSSVGDEGGWGGGGGWGSDSGGRKSSDGDGGWGGRKSNDGDGGWGGRKSGGGGAWG
GESSGGKEGGSGGW
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaacgctgtttacgatgatgaagacgatgctgagcttgaggacgaggaggga
gagcctgtccatggagacccagttgagggccgtggcgatgatgaggatgaagacgaagaa
gaaggtcaggatgagtatgaggatgatgggttcatagtggatgatgttgatgaagaagag
gaagaacaagaagaagaagaagaagaagagaagcaagatagtgatgaggagaggcagaag
aaaaagaagaaacgaagaaaaaaggatgatgatcttgatgaagatgattacttacttctc
caagataacaacatcaatatccaaaagaagaagtacaaacggttgaagaaagcgcggaga
gaatctgaaggtggaatggggttatctgatgatgaatttgatggaagtggtctaggtgga
cgaactgctgaggagaagattaaagacaggctattcgatgatgacgatggaggtccgctt
gaagatgtgggcgatgaggaagaactggtagaggaagaagatatcgagatcggggacgat
gatgaaatggcagacttcattgtagaggaagatgaactcgatgagcatggtgctcctgtc
aggcggaagaaggtgagaaagaaatctaggcaggcgccaggagtttcatcatcagctttg
caggaagctgctgatatattcggtgatgttgaagaactattgaaactccgcaagaaaggt
ttggcgtctaatgaaaggatggaaagaaggcttgaagatgaattcgaaccaactgtactc
tctgaaaagtatatgacagagaaggatgatgagattcgcatacttgatattcccgagaga
atgcagatatctgaagaaagcactggtagtcctcccatagacgaaattagtattgaggaa
gagagcaattggatatatgcccaactctcaactttgttaaaaggtccggatcaacaaggt
ttgcatgcttttgaggggcaggatgtctccataaacaaggatgatatcacacgatttttg
gagttacatcatgtgcagaaactagagataccctttatagctatgtaccggaaagagcag
tgcaggagcttattggatggtgctgattttggtgatgtcaatgcagacaagaaaccggaa
gtcaaatggcataaggtcttctggacgattcaggacttggatagaaaatggttacttctt
caaaagaggaaagcagcgctgcatggttattatacaaagcgttttgaagaagagtctagg
cgtatatacgatgagacgaggcttaatctaaatcagcatctctttgaatcaattattaag
tctcttaaggctgctgaaactgaaagagaagttgatgatgtagactcaaagttcaacttg
cattttcctcctggtgaaattgacgttgatgaagggcagtacaagaggcccaaaaggaaa
tcactttatagcatttgcagcaaggctgggctttgggaggttgcaaacaagtttgggtac
agtgctgaacaacttgggctagcattgtccctagaaaagctggttgatgaactggaggat
gcaaaagaaacaccagaggatatggcatcaaatttcgtgtgtgcgatgtttgaaaatccc
ctagcagtcctgaagggtgctcggcatatggctgccattgagataagttgcgagccgtcg
gtcaaaaagtatgtccgtggcatttatatggagaatgcagtgatctcaacgagtcctact
caagatgggaatgtggtaatagacactttccatcagttttcgggggttaagtggttacgt
gaaaagccattgagcaagtttcaggatgcacaatggcttctcatccagaaggctgaagag
gagaaacttctccaagtaaccttcaagctgccagaaaattacatgaataggttaatcagc
gactgcaatgaacactatctgagtgttggtgtaagtaaatatgctcaactttggaatgag
cagaggaaattgatattggaggatgcacttcacaattttcttttgccttcaatggagaaa
gaagcaagatccttgttgtctagcagatcaaagagttggttgctttcagagtatgggcag
gctttatggaacaaagtgtctgccgggccatatcaaaagaaggatatggacattggctca
gatgatgatgctgtaccacgggtcatggcatgctgttggggtcctggaaaaccagcaaat
acgtttgtgatgctggattcatctggagaggtgcttgatgtgctttatgctgggtccctc
actttgcgatctcaaaacgtgaatgaccagcaacgtaaaaagaatgaccaggatcgtgtt
ttaaagtttatgatggaccatcagccacatgttgtggctctaggagctgtcaatttgaat
tgcactcgtctgaaggatgatatttatgaggttatctttaagatggttgaggaaaatcca
agagatgtcgggcatgagatggacgagttaagctgtgtgtatgtcgacgaagctcttccc
aggctctatgaaaattcccggatctctgcggaacagctacctcagcagtcaggaattgtg
aaacgtgcagtcgctcttggacgctatcttcagaacccattggcaacagttgccacttta
tgtggaccgggtagggaaatcttgtcttggaaacttcatgccttggagaatttcctttca
ccagacgagaagtatgggatggttgaaaatgttatggtcgatgtgacaaaccaggttgga
atcgacgttaatttggctgcaagccatgaatggttatttgctcctttgcagttcatttct
gggcttggacctagaaaagctgcctccttgcagaggtctcttgtcagagctggttcaatt
tttgtccgtaaggacttgatatctcatgggcttggtaaaaaggtttttgtgaatgcagct
ggcttcttgcgtattcgtcgaagtgggctggctgctagtagcagccagtttcttgattta
ttggatgacacaagaatacaccctgaatcttatggtcttgcacaggaactagcgagagat
atttatgaagaggatgtaaaaggtgattcaaatgatgatgaggatgcagtagagatggca
atagagcatgtgagagataggcctagcttattgagaagcgttgaccttaaggaatatctg
gaaactaaaaagcgagagaacaagaaggaaacttataacgatatcatgagagaattgatc
aatggtttccaggattggaggaagccttttaaagatccaagcccggatgaagaattttat
atgctttcgggtgaaagtgaagaaactatagctgagggaagaattgtacaggccacagtt
cggaggatacagggtgggagagcaatatgtgtattggattctggcttaactgggatgctt
atgaaggaagattacacagatgactggagggatatcgttgagctgtcagacagactgcat
gaaggtgacatgctcacatgcaagatcaaatcactccaaaagaacagatatcaggttttc
cttgtctgcaaggaaagtgaaatgagaattaacaggcaccaacatgtccagaactttgat
ccttattaccatgaggatcagagcagtctccagaatgataaagtaaaagctcagaaagaa
aaggagctggggaggaagcacttcaagcctcggatgattgttcatccacgtttccaaaat
attactgccgatgaagcaatggagtatttgtctgataaggattttggggaaagcatcgtt
cgcccaagttctcgtggacccaattatttgactttgacactcaagatttatgatggagtt
tatgctcacaaagacatagctgagggtgggaaggagaacaaggacataaccagcctactt
cgtatcgggaagacgttgaaaattggggaggacacctttgaggatttggatgaggtcatg
gatcgatatgttgatcctttggtggctcatctcaaggcaatgctcaactatcggaaattt
cggaggggaaccaaaacagaagttgatgaacttctaaggattgagaaggctgaaaacccg
tcgaggatagtctacagcttcgggatttctcacgaacatccaggcacctttatactaact
tacatacgaagcacaaacccgcaccatgagtatataggcctatatcccaaggggtttaag
ttcaggaaaaggatgtttgaagacctcgacaggcttgtcgcgtatttccagaggcatatc
gatgatccgatgcatgaaccgtcgattaggtctgttgctgccagggtacccatgagaagc
ccggccgaacgtggttcttcggcaggaggtggttggggtggtagttcccacagcgaagga
ggttggaaaggtcactcttttgatagggatcattcttctacacctggttcaagatctggc
aggggaggtgatttcagaaacagtggcggcggtggcagagacgggcatccgagtggggca
ccgaggccatacggtggtggccgcggtcgtggacgaggaagaagagataacatgaacaac
gaaaggcaggattcagggtttgatactccgaaatggggttcttcttcaaaagatgggaat
gacgattggggcaataataacagcggcaccggaggaggcggtggttggggaagtgacact
ggaggaggtaaaaaaagcagcgtaggggacgaaggcggttggggaggaggtggcggttgg
ggaagcgattccggcggtagaaagagcagtgacggagatggcggatggggcggtagaaag
agcaatgacggagatggcggatggggaggtagaaagagcggtggcggtggtgcttggggt
ggtgagtcgagcggaggaaaagagggcggcagcggcggttggtga
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integrated database retrieval system
