Tarenaya hassleriana (spider flower): 104805989
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Entry
104805989 CDS
T04125
Name
(RefSeq) general negative regulator of transcription subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104805989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104805989
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104805989
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104805989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
104805989
NCBI-ProteinID:
XP_010529007
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MGATRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETREWLNSVVGELEQQIDSFEAELEGLTVKKGKTRPPRLTHLETSITRHKA
HIMKLELILRLLDNDELSPEQVNDIKDFLDDYVERNQDDFDEFSDVDELYSSLPLDKVES
LEDLVTTGPLVKGTPISSKNSLAASASITPSTVTSTRLQSTFLEQTEDKASTVNSDSIPK
TPLSKISTAAASQANEAQATPISVNVPSQSLTVTTKFTENSVNSLSPVSPSIAKGEDVAS
LPGRRLSPSLVRNSISIQSPSPIPLSPGGGPSGGAHSGVPLASETAKRNTLEIDSRLGNN
TSGQPPMSPLSNRMMLPHAAKSNDVTSVIDVNQSEASVIAGRAFSPSTISGMQWRPGSPF
QNQSETGQFPGRPEIVPDQKEIFLHRLQQVQQQSHGNLLGMSHLTGGNSKPMSTQQQNPL
LQQGSSMTPQGGPGSRVQLSGLTNNIGLQQQSSFMQEQLSQQLMSDIGTLKHEEMQQNLH
QDPIPEPASKTIEADLKPRPISPVSPPEPARAVEFSPGEPIQPNQVSGNLGAIGRRSAAD
LGAIGDGTSASPVNSGEIHDRRFRYQMLEAALKRLPLPKDSERPRQYSPRRPAATPPSYP
QVQAPIINNPMFWERLSNDTLFFAFYHQQNTYQQYLAAKELKKQAWRFHKKLNTWFQRHD
EPKIATDEYEQGAYVFFDYNVDKDGQHGWCSMIKHDFAFEYQYLEDELGA
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgggagctaccagaaagcttcaaggagagatcgatcgcgtcctcaagaaggttcaggaa
ggcgtcgaggtcttcgatagcatctggaacaaggtttacgacacagataatgctaaccaa
aaggagaagtttgaggcggatttgaagaaggagatcaagaaattgcagagatatagagat
cagatcaaaacatggattcagtcaagcgagatcaaggataaaaaggtcagtgcttcctat
gagcaggccctggtggatgcccgcaaacttattgagcgcgaaatggaaaggtttaaaata
tgcgagaaagaaactaagacaaaggcattctctaaagagggtttgggtcagcaaccaaaa
acggatccaaaggagaaggcaaagtccgagacaagagaatggttaaactctgtggttggg
gagttggagcaacagattgatagttttgaagcagaacttgaaggactgactgttaagaaa
gggaagacaagacctcctagattgacacatttggagacatccataactagacacaaggct
catataatgaagctagagttgatcttgaggcttctcgataacgacgagttgagtcccgaa
caagttaatgatatcaaagattttttggacgactatgtggagcgcaatcaggatgatttt
gatgaatttagcgatgttgatgagctatacagctcattgccgttagacaaggtggaatct
cttgaagatttggtgaccactggccctcttgtcaagggtacaccaattagctcgaagaat
tctttggcagcatcagcttctattacacctagcactgttacctctacccgactgcagagt
acgttcctggagcagactgaagataaagcttcgactgttaattctgactcaattccaaaa
actcctctgtccaaaattagtacagcagcagcttcacaagctaatgaggctcaggccact
cctatatctgttaatgttccttctcaaagtctgactgtgacaacaaaatttacggagaac
tctgtaaattccctttctcctgtaagcccatcaatagctaagggagaagatgtggccagc
ttgcctggtaggagattatccccatcccttgtgagaaacagtatctccatccaatcgcct
tcaccaatccctctatctccaggtggaggtcctagtggtggagctcatagtggagttcca
ttggcctctgaaaccgctaaaagaaatactttagaaattgacagcagacttggtaataat
acctcaggacaaccaccaatgtcaccactaagtaacagaatgatgttgcctcatgccgcc
aaaagcaatgacgtaaccagcgtgattgatgttaatcagagcgaggctagtgttatagcc
ggaagagccttttcaccttccacgatatctgggatgcagtggagacctgggagtcccttc
caaaatcagagcgaaacaggccagttccctggaaggcctgaaatagtacctgatcagaag
gagatatttttgcatcggttacagcaagttcaacagcaaagtcacggtaatctccttggc
atgtctcatcttactggaggaaatagtaagccaatgtctacccaacagcaaaacccgctc
ttgcagcaaggttcgtccatgacacctcagggtggtccaggatccagagttcagttatct
ggtctgactaataatattggtctccaacagcagtcaagtttcatgcaagaacaacttagt
cagcaactgatgtcagatatagggacattgaaacatgaggagatgcagcagaacttacat
caagatccaattccagaacctgcctctaagaccattgaagctgatctaaaacctcgacct
atctctcctgtgtcgccccctgagcctgctagagctgttgagttctctccgggagaaccc
atacagccgaatcaagtatcaggtaacctcggtgccattggtcgcagaagcgcagctgat
cttggtgcaattggtgatggcacaagtgcatcacctgtcaactctggtgaaattcatgac
cgaagattcagatatcagatgcttgaggctgctcttaagcgacttccccttccaaaagat
tctgaacgccccaggcaatatagcccgagacgacctgcagcaacccctccgagctatcct
caagtccaggcaccgatcattaacaacccgatgttctgggaaaggctcagcaacgacact
ctcttctttgcgttttaccatcaacagaatacctaccagcaatatttggcggcgaaagag
ctgaagaaacaagcttggagattccacaaaaaactcaacacatggtttcaacgtcacgac
gaaccaaagatcgcaaccgatgagtacgagcaaggcgcttacgtattcttcgactacaac
gtagacaaagatgggcaacatggatggtgctcgatgatcaaacatgatttcgctttcgag
tatcagtacctcgaggacgaactcggtgcataa
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