Tarenaya hassleriana (spider flower): 104806094
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Entry
104806094 CDS
T04125
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104806094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104806094
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104806094
Spliceosome [BR:
thj03041
]
Complex A
U2 snRNP components
U2 related factors
104806094
Complex B
104806094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FeoA
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
104806094
NCBI-ProteinID:
XP_010529114
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MEKRRRRVQEWQELRRKTEESEREKQGDGNDNAPQAGKAWTLEGESDDEEAPTEEKPETE
MDIDGDTKPGDVGDAMLVDSENGTAAASQGGGDGSDAEEEIDPLDAFMNSMVLPEVKKLS
NTAPLPIIEDGNADTKRNGNPNGEQSKKGSNKALGRIIQGEDSDSDYGEPENEEEDPALD
EDDEDFMKRVKKTKAEKLSLVDHSKIDYEPFRKNFYTEVKEISRMTQEEVNAYRKELELK
VHGKDVPRPVKFWHQTGLTSKILDTIKKFNFEKPMPIQTQALPVIMSGRDCIGIAKTGSG
KTLAFVLPMIRHIKDQPPVVAGDGPIGLVMAPTRELVQQIHSDIKKFTKVMGIRCVPVYG
GSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEP
QITRIIQNIQPDRQTVLFSATFPRQVEVLARKVLNKPVEIQVGGRSVVNKDIAQLVEVRP
ESERFWRLLELLGEWYEKGKILIFVHSQEKCDALFKDLLKHGYPCLSLHGAKDQTDREST
ISDFKSNVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVT
FISEDDARYAPDLVKALELSEQPVPDDLKALADSFMAKVKQGLEQAHGTGYGGSGFKFNE
EEEEVRKAAKKAQAKEYGFEEDKSDSEDEDDVVRKAGGDNISQQTATLAQIAALAAAKVT
APVTAGQLLPNGVGLAALPGVLPVPGVSIPGTAIPAIPSDGAARAAAIAAAINLQHNLAK
IQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYFPPGRIPGPG
DRKLYLFIEGPTEKSVKTAKVELKRVLEDITNQALSLPGGSQPGRYSVL
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacggaggagaagagtacaagagtggcaagagttgaggaggaaaacggaggaa
tctgagagagaaaagcaaggtgacgggaatgataatgcaccccaggccggtaaggcatgg
actcttgaaggagaatctgacgatgaagaagctcctacagaggaaaaacccgaaacagaa
atggacattgatggagacaccaaacctggagatgttggagatgccatgttggtggactct
gagaatggaacagctgctgcctctcaaggtggaggtgatggatcagatgctgaagaggaa
attgatcctttagatgcttttatgaattctatggtactccctgaggttaagaagcttagc
aatactgcccctctcccaataattgaagatggtaatgcggacactaagagaaatggcaat
ccaaatggtgaacaatcgaagaaaggttctaataaggcacttggtaggattatccaaggg
gaagattctgattctgattacggagaacctgagaatgaggaggaggatccggctttagat
gaagacgatgaggatttcatgaagagggtaaagaagacaaaagcagagaaactatccctc
gttgaccattcaaagattgactacgaacctttccggaaaaacttttataccgaagtgaag
gagatatctaggatgacccaagaagaagttaacgcttacaggaaggaattggagttaaag
gtacatgggaaggatgtgccacgacctgtgaagttctggcaccagactgggcttaccagt
aaaatcctggataccataaagaagtttaattttgaaaagcctatgcctatccagacacag
gcacttccggttataatgagcggccgagactgcattgggattgcaaaaactgggtcagga
aaaaccctggctttcgtattgccaatgatcaggcatatcaaagatcagcctcctgtggtt
gcaggggatgggccgatcgggctcgtgatggcacctaccagggaacttgtccagcagatt
cacagtgatatcaagaagtttaccaaggtaatgggtataagatgcgtgcctgtatatgga
ggatctggggttgcccagcaaatcagtgaacttaagcgagggactgagattgtggtatgt
actcctggcaggatgattgatattctttgcacaagcggtgggaagatcaccaatctgcgg
agagtcacctacttggttatggatgaagctgatcgtatgtttgatatgggatttgagcct
cagataactcggatcattcaaaacattcaaccggataggcaaactgtgctgttttctgcc
acttttccacgtcaagttgaagttctggcccgtaaagtgttgaacaaacctgtagaaata
caggttggtggaaggagtgtcgtgaacaaggacatagctcaattagtggaagtgaggcct
gagagtgaaaggttttggaggcttttagaacttcttggggaatggtatgagaaaggaaaa
atcttgatttttgttcactcacaggaaaaatgtgatgccttgtttaaggatttgcttaaa
catggttatccgtgtctctctctccacggggctaaggatcagactgatcgtgaatccaca
atatctgattttaagagcaatgtctgcaatttgttgattgcaacaagtgttgcagccagg
ggtctagatgtgaaagagctggagttggttgtaaactttgatgctccaaaccactacgaa
gactacgtccaccgtgttggcaggacaggcagggcaggacgaaaaggttgtgctgtcaca
tttatctctgaggatgatgcaagatatgctccggatctcgtcaaggctctggaactgtct
gagcagcctgttccagatgatctgaaggcactggctgatagtttcatggcgaaagtgaaa
cagggtctcgagcaagcccatggaacaggctatggtggtagtggatttaaattcaacgaa
gaggaggaagaagttaggaaagcagcaaagaaagcacaagcaaaggagtatggtttcgag
gaagataaatccgattcagaagacgaggatgacgttgtacgaaaggcgggtggtgataat
atctcacagcagacagctactcttgctcagatagccgccctagctgccgctaaagttacc
gctcctgtgaccgctggccaattgctgccaaacggggtcgggcttgctgctctgcccggt
gtccttccggttcctggtgtgtccattcccgggactgcgattccagccattccgagtgat
ggagcagcccgtgctgcagcaatcgcagctgccattaacctgcaacataacctagccaag
atccaagctgatgccatgcccgaacattacgaagcggaattggaaatcaacgatttccct
caaaatgctcggtggaaggttacccacaaagaaactctgggtccaatatcggagtggact
ggagccgccatcactacgagaggtcaatacttcccgccagggcgtatcccaggaccaggg
gatcgcaagctctacctgttcattgaagggcctacagaaaaatccgtcaagacagccaag
gttgaactgaaacgcgtacttgaagacattaccaatcaggccttgtcacttcccggcgga
tcacagcctggcagatactccgtcttatag
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