Tarenaya hassleriana (spider flower): 104806145
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Entry
104806145 CDS
T04125
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104806145
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104806145
Spliceosome [BR:
thj03041
]
Complex C
Other components
Complex C specific factors
104806145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
AAA_22
DEAD
HA2_N
AAA_30
AAA_19
T2SSE
AAA_7
Motif
Other DBs
NCBI-GeneID:
104806145
NCBI-ProteinID:
XP_010529181
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MAFWKPGTEKPRFVEDEEGGIVFLSSSLPSSSSGYGFTSMEKQRQRLPVYKHRTEILYLV
ETHATTIVVGETGSGKTTQIPQYLREAGWADGGRVIACTQPRRLAVRSVATRVAEEMGVN
LGEEVGYTIRFEDHTASGLTSVKFLTDGVLIREMMDDPLLTKYSVVMVDEAHERSISTDI
LLGLLKKIQRRRPELRLIISSATIEAKAMFDFFNSSKRRRVQEQEGDKKGPILEPAILSV
EGRGFDVKIHYVEEPVSDYVRTAVSTVLLVNEREPGGDILVFLTGQDDIEAAIKLLSEES
ESSKQRKSSGLLALPLYSGLSRAEQELIFAPTPRGKRKVIFSTNIAETSLTLEGVVYVID
SGFSKQKFYNPISDIENLVVAPISKASSRQRAGRAGRVRPGKCYRLYTEDYFVTQMPGEG
IPEMQRSNLVSTVIQLKALGIDNILGFDWPSPPSPETMIRALEVLYSLQVLDDDAKLTSP
TGFQVAEIPLDPMISKMILASSELGCSEEIITISAVLSVQSIWVIARGIQKDLDDAKLRF
AAAEGDHVTFLNVYRGFLDSGKSSQWCYKNFLNYQSMKKVIEIRDQLRRIAQRLGIPLKS
CDRDIQVVRKAVTSGFFANACRLQPHSNGVYTTVRGSEEVYIHPSSVLFRVNPKWVAYHS
IVSTDRQYMRNVITIDPSWLTEVAPHFYKNRQHPTVP
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttggaaaccagggaccgagaaaccgcgctttgtggaagacgaagaaggcggc
atagtgttcttatcgtcttctctcccctcctcttcttctggatatgggtttacgagtatg
gagaagcagagacagagactaccggtttataagcacaggacggagattctgtatcttgta
gagactcacgccactaccattgtcgtcggcgagacgggtagtggcaaaaccactcagatt
cctcagtaccttagagaagctggatgggcagatggaggccgtgttattgcttgcactcag
cctagacgtctagccgtccgctcagttgccacaagagtggcggaagagatgggagtgaac
ctcggggaagaggttggctacactatccgattcgaagaccatacagcttcgggcttaacc
agcgtgaaattcctcacggacggagttttaatccgagaaatgatggatgatcctctcttg
actaagtacagcgttgttatggtagatgaagcccacgagagatcaatctcaactgacatt
ttgttgggtctcctgaaaaagatccaacgacgtcgtcctgaattgcgtttgattatctcg
tcggccaccattgaggcaaaagcaatgttcgatttctttaactccagcaaaaggagacgg
gttcaagaacaagaaggagataagaaaggaccgattttggaacccgcaatcctatctgta
gagggcagaggcttcgacgttaagattcactatgttgaggagcctgtttcagattatgtc
cgaactgctgtttcaactgtattgctggttaatgaacgagaaccgggtggggatattcta
gtattccttaccggtcaggacgatatcgaagctgccattaaacttctttcggaagaatct
gagagcagcaaacaaaggaaatcatcgggactactagccctgccgctatattcaggcctt
tcacgagcagaacaagaactgatctttgctcccactcctcgaggcaagaggaaagtgata
ttctcgacaaatattgctgaaacatcgttgacactcgagggtgttgtctacgtgatcgat
agtgggttctcgaagcagaaattctacaacccgatttcagacatcgaaaatctcgtggtg
gcaccaatatccaaagcatcttctagacaaagagctggaagggctggtcgagttcggccg
gggaaatgttatagactatacaccgaagattatttcgtgacccaaatgcctggagagggc
atacccgagatgcagagatcaaaccttgtttctactgtgattcagctcaaagctttgggg
atcgataatatattgggattcgattggccgtcacctccttccccagaaacgatgatccga
gcccttgaagtgctttattcgttacaagtactggacgatgatgcaaaactgacttcgccc
acgggattccaagttgcagagattcctcttgacccgatgatctcgaagatgattttagct
tcaagtgaactcggttgttctgaggagatcattacaatttctgctgttctgtctgtccaa
tccatttgggtcattgccaggggaatacagaaagatctcgatgacgcgaaactgagattt
gctgctgccgagggcgaccatgtcactttcctgaacgtctaccgagggtttctcgactcg
ggaaagtcttcccagtggtgttacaagaatttcttgaactatcagtccatgaagaaggtg
attgagataagagatcaactccgaaggattgcacaaagattaggaatccccttgaaatct
tgtgacagagacatacaggttgtaagaaaagcagtgacttccgggtttttcgccaatgct
tgtcgcttacaaccacacagcaacggggtgtacacaacagttagaggctcggaagaagtg
tatatccatccgtcatcggttttgttcagggtgaacccgaaatgggtggcttaccattcc
atcgtctcgacggatcgtcaatacatgcgcaatgtcatcaccatcgatccttcttggctc
accgaagtggctccacacttttataagaaccggcaacatcctaccgtcccttaa
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