Tarenaya hassleriana (spider flower): 104806192
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Entry
104806192 CDS
T04125
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E-like isoform X1
KO
K07466
replication factor A1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03030
DNA replication
thj03420
Nucleotide excision repair
thj03430
Mismatch repair
thj03440
Homologous recombination
thj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104806192
03420 Nucleotide excision repair
104806192
03430 Mismatch repair
104806192
03440 Homologous recombination
104806192
03460 Fanconi anemia pathway
104806192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thj03000
]
104806192
03032 DNA replication proteins [BR:
thj03032
]
104806192
03400 DNA repair and recombination proteins [BR:
thj03400
]
104806192
Transcription factors [BR:
thj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104806192
DNA replication proteins [BR:
thj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104806192
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104806192
MMR (mismatch excision repair)
104806192
DSBR (double strand breaks repair)
HR (homologous recombination)
104806192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
RADX
DUF223
Fer4_9
Fer4_10
DUF936
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
104806192
NCBI-ProteinID:
XP_010529261
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MAVNLSPGAVVRMLNGEVTTEKEMMPVLQVTELKLVQSKREPMKERFRMLLSDGTYLQQG
MLGTSQNDLVKRGILQAGSVVKLTRFVCNLIQGRRIVIVIELEIVVEKYSIIGNPVQAGK
PNDPGHASTDQRGGVTGDKPHIGGFEQQARGNELSGSRQINVPDSGRYAAAGSPQVGQNP
SFATGSGYPGFEQQARGNELRSNPTAGYGSSRHEQSWPPPTAQSRPVRPVYPPQPPPPMY
NNRGPVARNEAPPRIIPIAALNPYQGRWTIKVRVTSKSEFRHYSNPRGDGKVFSFDLLDA
DGGEIRVTCFNAVADQFFDQIVAGNVYLISRGSLRPAQKNFNHLPNDYEIILDNASTIQP
CYEDDAAIPRQKFHFRSISDIESMENNNIVDVIGVVSSISPTASIMRKNGTETQKRALQL
KDMSGRSVELTMWGNFCNAEGQNLQNLCDSGSFPVLAVKTGRISEFNGKAIGTIASSQLL
INPDFPESRKLKEWFEREGRNMPSISISRESFSSGKPDVRKTISQIKDEKLGTSEKPDWI
TVNATIIYMKADNFCYTACPIMNGDRPCSKKVTNNGDGTWRCDKCDQCVAECDYRYILQL
QIQDHTGLTWVTAFQEAGEEIMGISAKDLYYVKHEHQDDEKFAEVIRKMAFKKYNFKLKI
KEETFSDEQRIRATVVKAEKVNYTSDTRFLLEAMDKLRTEEANSNYSSSEAFNGGTTCTR
GETGMDGRQVGQYEKEYGGSGHVSAHCPSVVSEPAGQYNRGGGGGYSSGGISSGEGTYGG
GPPRQHVGGY
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaatctgtcgccgggggcggttgtgaggatgttgaatggggaagtgacgacc
gagaaagaaatgatgccggtgttgcaagtgaccgagttgaagctggttcagagcaagcgg
gagccgatgaaggagaggtttcggatgttgttgtctgatgggacctacttgcaacagggg
atgctcggaacttctcagaacgatcttgtgaaaagagggattctgcaagccggttcggtt
gttaagctcactcgtttcgtctgtaatctcatccaaggtcgaaggatcgttattgttatt
gaactggagattgtagtagagaaatatagtataattggaaatcctgtacaagcgggaaag
cctaatgatcctggtcacgcctccactgatcagcgtggaggggttactggagataaacca
catataggtggctttgagcaacaagctagagggaatgaattgagcggtagccgtcaaatc
aacgttcctgactcagggagatatgctgcagctggttcacctcaagttggccaaaatcca
tcatttgccactggttctgggtaccctggatttgagcaacaagctagagggaatgaattg
aggagtaatccgactgcaggttatggaagctcaaggcacgagcaatcttggcctcctcca
accgctcaatcccgtcctgttcggcctgtgtatccaccccaaccaccaccaccaatgtac
aacaataggggacctgtggctaggaacgaagctcctcctaggataataccaattgctgcc
cttaatccttaccagggccggtggaccatcaaggtcagagtcacaagcaaatcagaattc
aggcactatagcaatccccgtggggatgggaaggtgttctcttttgatcttcttgatgct
gatggtggagaaatacgggttacgtgttttaatgctgtggccgatcaattctttgaccag
attgtagctggtaatgtttatctgatctcaaggggaagtttgcgacctgctcagaaaaac
tttaaccatctccccaatgattacgagataattctggacaatgcatcaacaatacaacca
tgctatgaggatgatgctgccattccgcgccagaagtttcattttcgttccatcagtgat
atcgaaagcatggagaacaacaacatagttgatgttatcggtgttgtctcatccatcagc
ccgactgcatcaattatgcggaaaaatgggactgaaacacagaaaagagcacttcagttg
aaggatatgtctggccgtagtgttgagttgactatgtggggtaatttctgcaatgccgaa
gggcagaacctgcaaaatctgtgcgactctggttcattcccggtccttgcggtgaagacg
ggtaggatcagtgaatttaacgggaaggcaattggcactattgcatcaagtcagctactc
attaacccggattttcccgaatcccgtaagctgaaggaatggtttgagagagagggccgg
aacatgccttctatctccatatccagggagagtttcagcagtgggaaaccagatgttcgg
aaaacgatctcccagatcaaggacgagaagctcggtacctcagagaagcctgactggatc
accgtcaacgcaaccattatatacatgaaagccgacaatttctgctacacggcttgtccg
atcatgaatggagatcgtccctgcagcaaaaaagtcacgaacaacggagatgggacatgg
agatgcgacaagtgcgatcagtgtgtggctgaatgcgactacaggtatatactgcaactc
cagatacaggaccatacgggactaacatgggtcacagcatttcaggaggctggtgaagag
ataatgggaatatctgctaaagatctgtattacgtgaaacacgaacatcaagatgacgag
aaatttgcggaggtgatccgtaagatggcattcaaaaagtataacttcaagctgaagatc
aaggaggagacgtttagcgacgaacagaggataagagcaacggtggtgaaagctgagaag
gtgaactacacctcagatacgaggtttctgctggaagcaatggataaactcaggacagag
gaggcgaactcgaactacagcagctcggaagcgttcaatggcgggaccacatgtacacgt
ggagagacggggatggatggaaggcaagtgggtcagtatgagaaagagtatggcggaagt
gggcatgtatctgcacactgtccaagtgttgtgagtgaaccagcagggcaatacaatagg
ggtggtggtggtggttatagcagcggcggaatatcttccggcgaaggaacatacggagga
ggtccacccaggcaacatgtcggtggctactga
DBGET
integrated database retrieval system
