Tarenaya hassleriana (spider flower): 104806288
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Entry
104806288 CDS
T04125
Name
(RefSeq) DNA-directed RNA polymerase II subunit 2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03020
RNA polymerase
thj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104806288
09124 Replication and repair
03420 Nucleotide excision repair
104806288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thj03021
]
104806288
03400 DNA repair and recombination proteins [BR:
thj03400
]
104806288
Enzymes [BR:
thj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104806288
Transcription machinery [BR:
thj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104806288
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104806288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
104806288
NCBI-ProteinID:
XP_010529417
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MEDYNEYEQQYVDEDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
SADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT
YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPST
MFVRMLSRASSKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ
MMEFLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDKRIKYAKDILQKEMLPHVGTGDF
CETKKAYYFGYIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
SYVQKCVDNGKDVNLQFAIKAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVN
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVENQALLIKKKDIYALQQRESSEEGGWHDLV
AKGFIEYIDTEEEETTMISMTINDLVQARLRPEDAYSDTYTHCEIHPSLILGVCASIIPF
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
RANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQGQASRYTRRDHSIS
LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP
WTAEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVENISRALH
KCGYQQRGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCECCGLIALANLKKNSFE
CRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDLKSVKEQGKKGGA
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggaggattacaacgaatacgaacagcaatacgtagatgaagatgatgacgaggagatc
acccaggaggatgcctgggccgtcatctccgcctacttcgaggagaaaggtctcgtgcgt
cagcagctcgactcgttcgacgagttcattcagaatacgatgcaggaaattgttgatgaa
tccgctgatatcgagatccgaccggagtcccagcacaatcctggtcaccaatctgatttc
gccgagacaatctacaagattagctttggccagatttatttgagtaaacccatgatgaca
gagtctgatggagagactgcaaccttgtttccgaaggctgcaaggctgaggaatctcact
tattctgccccactatatgtagatgttactaagagagttataaagaaaggccacgacggt
gaggaagttacagaaacacaggattttaccaaagtttttattgggaaggttcctataatg
cttcggtctagctattgtaccttgtatcagaattcggagaaagatttgaccgagctaggg
gagtgtccttatgaccaaggtggatactttataattaacggaagcgaaaaggttctcatt
gctcaggaaaagatgagcacgaatcatgtttatgtctttaagaagaggcaaccgaacaaa
tacgcatacgtagctgaagttcgttccatggctgagaaccaaaataggccgccaagcacg
atgtttgtccgtatgctttctcgggcaagttccaaaggggggtcgtcagggcagtatatt
cgctgcacccttccatacatcagaactgaaattcctattatcatagtgtttcgagcattg
ggatttgtggcagataaggacatattggaacacatttgctatgacttttctgatacccag
atgatggaatttctccggccttccttggaagaagcgtttgtgattcaaaatcaacaggtt
gcgcttgactatatagggaaacgtggagcaacagttggtgtaaccagggataagaggata
aagtatgctaaagatattcttcagaaagaaatgcttcctcatgttggaactggggatttt
tgtgagacgaagaaggcatattattttgggtatatcatacaccggttgctgctttgcgct
attggccggaggccagaagatgacagggatcattatggcaacaaaaggctggatcttgcc
ggtcctttacttggaggcctgtttagaatgcttttcagaaagctgacaagggatgtgaga
tcttatgtacagaagtgtgtggacaatggaaaggatgtcaatctgcaatttgctattaaa
gctaagactgttacatccggcctcaaatattctcttgctactgggaattgggggcaggca
aatgctgctggtactagagctggagtctctcaggtgttaaatcgattaacatatgcttcc
actttgtcgcacttgaggcggttgaattctcctatagggcgtgaaggaaaattggcaaaa
ccgcgccaactacacaactcacagtggggaatgatgtgtcccgctgaaacgcctgaagga
caggcttgtggtctagtgaaaaacttggcactcatggtctatataacagtcgggtcagct
gcctatcccatattggaatttttggaagaatggggtactgagaattttgaggaaatctct
ccagccgttatcccccaagcaaccaaaattttcgtcaacggatgttgggttggaatccat
cgagatcctgacatgttagtaaaaaccttgagacgtttgagaagacgggtcgatgtaaac
actgaagtcggtgttgttagagatattcgtctcaaggagcttcggatctataccgactac
ggtcgttgtagtcgtccattattcattgtggagaatcaggcgcttctaataaagaagaag
gatatctatgctttgcaacaaagggaaagctctgaagaaggtggctggcatgacctggta
gcaaagggtttcatagaatatatagatacagaggaagaagagacgacgatgatttcgatg
actatcaatgatctggtgcaagctagattgcgccctgaggatgcttattctgatacttat
acacattgtgagattcacccatctttgatattgggtgtatgtgcttcaattattcctttt
cctgaccataatcagtcgcctcgtaacacataccaatctgccatgggtaagcaagcgatg
ggcatatatgtcaccaactaccaatttcgcatggatactctggcctacgttctctattac
cctcagaagcctcttgttactacaagggctatggagcaccttcactttaggcagcttcca
gctggcattaatgctattgttgccatttcatgctactctggttacaaccaagaagattcc
gtcattatgaaccaatcttcaatagatcgtggcttcttccgatctctgttcttccgttca
tacagagatgaggagaaaaagatgggaacacttgtcaaagaagactttgggcggcctgat
agagctaataccatgggaatgcggcatggctcttacgataagttagacgatgatggtctt
gctcctcctggtacaagagtttcgggtgaagacgtaattattggaaagactactccgtta
tctcaagaagaggctcaggggcaggcttcacgttacacaagacgggatcacagcataagc
ttgcgtcatagtgaaactggcatagtggatcaggtgttattgacgacaaatgcggatggt
ttgcgatttgtgaaagttagggtaagatctgttagaattcctcagattggtgacaagttc
agcagtagacacggtcagaagggaacagtcggcatgacctacactcaagaggatatgcca
tggacggccgagggcatcactcccgacattatcgtgaacccacatgccatcccgtctcgt
atgacaatcgggcagcttatcgagtgtatcatgggcaaggtggcggctcacatgggcaag
gaaggagatgctactccttttacagatgtcactgtggagaacataagcagagctctgcat
aaatgtgggtaccaacagcgtggattcgagaggatgtacaatggccacacaggaagaccg
ctcacagctatgatattcctcggaccgacatattaccagaggctgaagcacatggttgac
gacaagattcactcgcgtgggcgaggtccggtccagatcctcacgaggcaaccggcggag
ggaaggtcacgtgacggcggtctgcgtttcggagaaatggaacgtgactgcatgatagca
catggcgcagctcatttcttgaaggagaggttgtttgaccagagcgatgcgtacagggtg
catgtctgtgagtgctgtggactcatcgcccttgcaaatctgaagaagaactcgttcgaa
tgtagaggttgcaagaacaagacagatattgttcaggtgcatattccatatgcatgcaag
ctgctgtttcaggaacttatgtcgatggcgatagcgccgaggatgcttacgaaagatttg
aaatccgtgaaagagcaggggaagaaaggtggagcttga
DBGET
integrated database retrieval system
