Tarenaya hassleriana (spider flower): 104806760
Help
Entry
104806760 CDS
T04125
Name
(RefSeq) regulator of nonsense transcripts UPF3-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03013
Nucleocytoplasmic transport
thj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104806760
03015 mRNA surveillance pathway
104806760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104806760
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104806760
mRNA cycle factors
P-body specific factors
104806760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
BRAP2
RRM_2
Motif
Other DBs
NCBI-GeneID:
104806760
NCBI-ProteinID:
XP_019057279
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MKDLLQKRKVVVRHLPPSISQSDLLSHIDARFADRYNWFAFRSGKSSHKNQKYSRAYIEF
KTPEDVCDFASFFNGHVFVNEKGAQCKAVVEYAPSQRAPRPCGKKDPREGTICKDPDYLE
FLKIIAKPVENLPSAEIQLERKEAEQSGTTRDTLIVTPLMEFIRKKRAAVIETQGLSDVR
KASRRARAASANKPNSRSSKRSSEKKKYVAKDHAKNMLQKAKSAYVASFKQDNQHLTSSE
KEIPENETAAVSVIESSLPGIPLTMESGKKKILLLKAKNQDSSNPLPQSEQQIETSPVGS
SLASRQNQKSDVGGKLIKGILLKHEPRQSQSSSSVQPQQKAPSSNMENSKRPPRPANTRA
DGKFAGKDYPGPGTLGEKQERRMRNKERPDRVVWAPLHRADGLSVGEDHLSSSAANNGEV
NGENLVQKTGEVAASCGGRHSYSMENGSARHTSRRIGARSRKDDGLGMTGDGKSLRRGGS
GGSNSHEKQMWVQKSSSGS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatctgttgcagaagaggaaagtggttgtacggcacttgccgccgtctatttct
cagtcggatctcttgtcccatatcgacgctcgtttcgctgatcgttacaattggtttgct
tttcgttctgggaaatccagccataagaatcagaagtattctcgggcctacatagagttc
aagactccagaggatgtttgtgactttgcttcctttttcaacggccatgtgtttgttaat
gagaagggtgctcaatgcaaggctgtagttgaatatgcaccttcacagcgtgcgccaaga
ccatgtggcaagaaagatcctcgtgaagggactatttgcaaggaccctgattatctggaa
ttccttaagatcatcgcaaaacctgttgagaaccttccgagtgctgaaatacagttggaa
agaaaagaagccgaacagtctgggacgacaagagacactctcattgttactcctcttatg
gaatttatacgcaaaaaacgtgctgcagtgattgaaactcagggtttgtcagatgttcgc
aaagcaagcagaagagccagagctgcctctgcaaacaagccaaattcaagatcttcgaaa
cgaagctctgaaaagaaaaagtatgttgcaaaggaccatgcaaagaacatgctgcaaaaa
gctaagtcagcctatgtagcgagctttaagcaagacaatcagcatttaacttcaagtgaa
aaggagatccctgaaaatgaaactgcagcagtctctgttatcgagagctctctcccagga
attcctttgactatggaatctggaaagaaaaaaatattgcttttgaaagcaaaaaaccaa
gacagttctaaccctctgccacagtcagagcagcagattgaaacatctcctgttggaagt
tcattggcttccagacaaaaccagaagagtgatgttggtgggaagttgatcaagggcata
cttctgaaacatgagccacgacagagccagtcttcatcttctgtccagcctcaacaaaaa
gcaccatcatctaacatggaaaacagcaagcgacctcctcgacctgccaacacacgggca
gatggtaaatttgcaggtaaagactatcctggtcctggcaccctcggtgaaaagcaggag
aggcgcatgagaaacaaagaacgacctgatcgtgttgtgtgggctccgcttcatcgtgct
gatgggttgagtgttggtgaggaccatctgtcatcttcagcagccaataatggagaagtg
aacggcgagaaccttgtccagaagactggggaagtggcagcttcttgtggtggccgccat
tcatattctatggagaatggttctgccagacataccagtcgtcgtattggagcacgtagt
agaaaagatgacggccttgggatgactggtgatggcaaatctttgagaagaggtggcagc
ggtggttcgaattctcacgagaaacaaatgtgggttcagaagtcttcttcggggtcatga
DBGET
integrated database retrieval system
