Tarenaya hassleriana (spider flower): 104806843
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Entry
104806843 CDS
T04125
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104806843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thj03021
]
104806843
03019 Messenger RNA biogenesis [BR:
thj03019
]
104806843
Transcription machinery [BR:
thj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104806843
RNA polymerase I system
104806843
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
104806843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW
Spt5-NGN
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
KOWx_SPT5
Spt5_N
ProQ_C
DUF4438
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
104806843
NCBI-ProteinID:
XP_010530229
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MARRRGDDDDDDLDEEYGEEDAAAEFDDEEEEEIVGRGGSSSRKRGRSDFIDDYAEEDSE
EEEEDEEDDDYGGRGARGNKKKKKSSASIFLDEEAQVDEEDEEEEEEGEDDFIVDGGADI
PDEGVGRRLHERRFLSREENEEDVEDLERRIQERYSRHHAEYDEEATDVEQQALLPSVRD
PKLWMVKCVIGREREVAVCLMQKFIDRGSDLQIRSVIALDHLKNYIYVEADKEAHVKEAI
KGMRNIFHSQKILLVPIREMADVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVR
QRVTVKLIPRVDMQALANKLEGREVVKKKAFVPPPRFMNIDEARELHIPVERRRDPITGE
YFENIGGMQFKDGFLYKTVSMKSITAQNITPSFDELEKFNKPSENGESNIASLSTLFANR
KKGHFMKGDAVIVIRGDLKNLKGWVEKVDEENVHIKPEMKGLPKTVALNERDLCKYFEPG
NHVKVVSGTHEGTTGMVIKVDQHVLIILSDTTKEDIRVFADHVVESSEVTTGATKIGDYE
LHDLVLLDNLSFGIIIRLENEAFQVLKGVPDRPEVALVKLREIKCKIEKKSDAQDRYKNT
ISVKDVVRVIEGPSKGKQGPVMHIYKGVLFINDRHHLEHAGFICAKCTSCVVVGAPRPGA
DRNGDSFSRFGTFKTPAPVPQSPRRFQRGGMGYNSGGRHRGGRGGHDALVGTTVKIRLGP
HKGYRGRVVEVKGPSVRVELESQMRIVTVDRNAISDNVVVTPTRDTSRYGMGSETPMHPS
RTPLHPYMTPMRDPGVTATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQ
YQVRFHPWAYR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcgcagaggcgatgacgacgatgatgatcttgacgaggagtacggtgaagag
gatgctgcggcagagtttgacgatgaagaggaggaggagatagttggccgtggcgggagt
tcgagtcggaagaggggaagatcggattttattgatgattatgcggaggaggattccgaa
gaggaggaggaggatgaggaagacgatgattatggaggtcgtggagcaaggggaaataag
aagaagaagaagtcttcggcttccatatttttggatgaggaagctcaggtggatgaggag
gatgaagaggaagaagaagaaggagaggacgatttcatagtggatggtggagccgacata
cctgatgagggtgttggtagacgacttcatgaacgtaggtttctttctcgtgaggaaaac
gaagaggatgttgaagaccttgaaaggagaattcaggagaggtattctaggcatcatgcg
gaatatgatgaggaggccacagatgttgagcagcaagcacttttgccatcagtccgggat
ccaaaattgtggatggtgaaatgtgtgattggccgtgaaagggaggttgctgtttgtcta
atgcaaaaattcattgatagaggatcagatttgcagatcaggtctgttattgcacttgat
catctgaaaaactatatatatgttgaagcagataaggaagctcacgtgaaagaggccatc
aagggaatgcggaatatttttcatagtcagaagattttacttgttcctataagagaaatg
gcagatgttctgtccgttgaaagcaaagcaattgatttatctcgggatacctgggttaga
atgaagattggaacatataaaggggatcttgctaaggttgttgatgtagataatgtgcgt
cagagggtcacagtcaagttgatcccgagggttgatatgcaggcactagctaataagttg
gaagggagagaagttgtaaagaaaaaagcctttgttcctcctccgcgcttcatgaatatt
gatgaggcgagggaattgcacattcctgttgagcgccggagagatccaattactggtgaa
tacttcgaaaatattggtggcatgcaattcaaagatggtttcttgtacaaaactgtctcg
atgaagtcaattactgctcagaatattacaccaagttttgatgagcttgaaaaattcaat
aaaccaagtgaaaatggggagagcaacattgctagtctgtcaactttatttgcaaacaga
aagaaagggcatttcatgaagggggatgcagttattgtcatcaggggtgatctaaaaaat
ttgaagggatgggtcgagaaagtggatgaagagaatgttcatatcaagccagaaatgaaa
ggcctccctaaaactgttgctttaaacgagagagacctttgcaaatacttcgaacctgga
aatcatgtgaaggttgtttctggaacccatgaaggaacaaccggcatggttatcaaagtt
gaccagcacgttcttatcattctgtctgatacaactaaagaagatatacgtgtatttgct
gatcatgtcgttgagagctcagaagtgacaacaggtgctaccaaaattggagactatgaa
ctccatgaccttgtccttctggataacctgagctttggaataatcatacgactggaaaat
gaagcttttcaggttcttaaaggggtcccagacagaccagaggttgctcttgtcaaactc
agagaaatcaagtgcaaaattgagaagaaatctgatgcgcaagaccgctacaaaaatacc
atctctgtgaaagatgttgtcagagtcattgagggtcctagcaaaggaaagcaaggtcca
gtgatgcatatttataaaggggtcttatttataaatgaccgacatcaccttgagcatgct
ggatttatctgcgctaagtgtacatcatgtgttgttgttggtgcaccacgccctggtgct
gatagaaatggtgattccttctcaaggtttggcactttcaagacaccagccccagtaccc
caatctccaaggagatttcaacgtggaggcatgggatataactctggagggagacatagg
ggaggaagagggggtcatgatgccctggtgggtactacagtcaaaattcgcctgggtcct
cacaagggatataggggacgtgtagtggaagtcaaaggtccatcggtacgtgtggaactt
gaatctcagatgaggattgtgacagttgaccggaatgcaatttcagataatgtggttgtg
acaccaacaagagacacatctcggtatggtatgggaagcgaaacacctatgcatccttct
cgcactccacttcatccatatatgactccaatgagggatcctggagtaacagctacacct
atccatgatgggatgagaacccccatgcgtgatagagcttggaacccttacacgcctatg
agtccacctagggataactgggaagatgggaatccgggttcttggggaacaagcccacag
tatcaggtaagatttcatccatgggcctaccggtga
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