Tarenaya hassleriana (spider flower): 104807020
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Entry
104807020 CDS
T04125
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104807020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104807020
Spliceosome [BR:
thj03041
]
Complex A
U1 snRNP components
U1 related factors
104807020
Complex B
104807020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
104807020
NCBI-ProteinID:
XP_010530434
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MANNPPQSSGAQFRPMVPGQQNQPFVPAASQPFHSFGHVHPNAGMPVVQSQPPQFSQPMQ
QLFPVRPGQPGHITSSSHAVSVPYTQTNRPLTSGSTQPQPNTHMMGGYGAPSYPSKFLLS
SYGQQQAQPKIQPAPQVLVAGQQAPQTWAASGSQSTTPVPVQQTGQQTPVNASTEPASLT
PQSASASEWQEHTSADGRKYYYNKRTKQSSWEKPLDLMTPLERADASTVWKEFSTPEGRK
YYYNKATKESKWTIPEELKLARDLGQRAVAQGSQSEVGTTSEPQVAAFSSDPAISTAVTS
VVPSASVTLPAQSASPVPTSMAVTVSHPSSVAPITPTSAATSDTGPASTKADNLASQGAA
GSNCGVPAHNIEVENKGIAVNGKTNLAPAGGKVNGEEPLVYATKQEAKAAFKSLLESVNV
HSDWTWEQTMKEIVNDRRYGALRTVGERKQAFNEYLGQRKKVEAEERRMRQKKARETFVK
MLEECEELTSAMKWSKAVSLFEIDERFKAVERTRDRENLFDNYILELEKKEREKAVEEHR
RNMAEYRKFLEACDFIKVTSQWRKVQDQLEDDERCSCLEKIDRLIGYEEYILDLEKEEEE
HKRVEKEQIRRAERKNRDAFRSIMEEHVASGDFTAKTYWRDYCMKVKDLPQYQAVASNTS
GSTPKDLFEDVIEELEKQYHDDKNRTKDAMKSKKISMVSSRTFEDFKSSVLEDLSSQPIS
DINLKLVYDDLLERAKEKEEKEARKRQNLAEDFTKLLNTFKEITATSTWEDSKSLFEESE
EYRLIGDENACRGIFEEYILTLQEKVKEKEHKREEEKWFGNLQMRKEKEREEKEKRKEKE
KEKEKERKEKEREREKGRGKERSRREDSDGENADMTEGHKDDKRKGKDRDRRHRRRHHNS
DDDDDVSSDRDDREESKKSRKHGSDRKKSRKHGHSPQSDSESRHKRHKKDYRDTSRRSGN
DELEDGEVGEDGEIQ
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaaccctccgcaatcttccggtgctcagtttcgaccgatggttcccggacaa
cagaatcagccttttgttccagcagcttcgcagccttttcattccttcggacatgtacat
ccaaatgccgggatgccagttgttcaaagtcagcctccacagttttctcagccaatgcag
cagctctttccagtgagaccaggtcagcctgggcatattacgtcctcgtcacatgcagta
tcagtcccatacactcaaacaaacaggcctcttacatctggatctactcaaccacagcca
aacactcatatgatgggaggctatggtgctccttcatacccgtcgaagtttctgctatct
tcttatggtcagcaacaagcacaacccaaaatccaaccagctcctcaggtgcttgtggct
ggtcaacaagcaccacagacttgggctgcgtctggaagtcaaagtacaacacctgtaccc
gtacagcagactggtcaacaaacaccagtcaacgcttctactgagccagcaagcctgact
ccacagtccgcatccgcatctgagtggcaggagcatacatctgctgacggaagaaagtat
tattacaataagcggactaaacaatcaagttgggagaaacctcttgatttgatgacacca
ctcgagagggctgatgcatccactgtatggaaggaattctcaacacccgaaggaagaaag
tattactataacaaggctacaaaggagtctaagtggacaattcctgaagaactgaagcta
gctcgtgacctgggccagcgagctgttgcacagggatcccagtcagaagttggaactact
tccgagccccaagttgctgcattttcatctgatccggcaattagcacagctgtcacttcc
gttgttcccagcgcctccgtgacattacctgcacagtctgctagccctgttccaacttca
atggctgtaactgtcagtcatccttcctctgtggctcccattactccaacatctgctgca
acaagtgataccgggcctgcttcaacgaaagcagataatttagcgtctcagggtgcagct
ggttctaattgtggagttccagcacacaacatcgaggttgagaataaggggattgcagtg
aatggcaaaaccaatttggcacctgctggaggcaaagtaaatggggaggaacccttggta
tatgctactaagcaggaggcaaaggctgcctttaagtctcttttggaatctgtaaatgtt
cattctgactggacttgggaacagactatgaaagagattgttaatgatagaagatacggt
gctttgaggacagttggtgagcggaaacaggcttttaacgagtatctgggtcaaagaaaa
aaggttgaagctgaggaaagacgaatgaggcagaagaaagctcgggaaacatttgtcaag
atgttagaagagtgtgaagaacttacatcagcaatgaaatggagcaaagctgtaagtttg
tttgaaattgatgagcgctttaaagcagttgaacgcacaagggatcgtgaaaatcttttt
gacaattacattttggaactcgagaagaaggaaagagaaaaggctgtagaggaacatcga
agaaacatggctgaataccgaaagtttcttgaggcctgtgattttatcaaggttacttca
caatggcggaaagttcaagatcaactggaggatgatgaaagatgctcatgtcttgaaaag
atagatcgtctgattggttatgaggaatacattcttgacctggagaaggaagaggaggaa
cacaagagggtagagaaagaacaaattaggcgggctgagagaaaaaatcgtgatgcattt
cgttcaataatggaagaacatgttgcatctggcgattttactgctaaaacttactggcgg
gattattgcatgaaggttaaagatttgccccagtaccaagctgttgcatctaatacctct
ggttccactccaaaggacttgtttgaagatgtgatagaagaattagagaaacagtatcat
gacgataaaaaccgtacaaaggatgctatgaagtccaagaagatttccatggtctcctca
cggacatttgaagacttcaaatcttctgttttggaggatctcagttctcaaccaatatca
gacattaatctcaagcttgtatatgatgatttgcttgagagagcaaaggaaaaagaagaa
aaagaggctagaaaacgtcagaatttggccgaagatttcaccaaattgctgaatactttt
aaggaaataactgctacttcaacttgggaagatagcaaatcactatttgaagaaagtgaa
gagtacagattgattggagatgaaaatgcttgcagagggatttttgaagaatacatactg
accttgcaggaaaaggttaaagaaaaggaacataagcgtgaggaagaaaagtggtttggg
aatttgcagatgaggaaagagaaagagagggaagagaaagagaaacggaaggagaaggag
aaggagaaggaaaaggagagaaaagaaaaagagagagaacgcgaaaagggtagaggaaaa
gagagaagtagaagagaagactcagatggcgaaaatgcagatatgacggaaggccacaaa
gatgacaaaaggaagggaaaagacagagacagaagacataggagacgacaccataattct
gatgacgacgacgatgtaagttctgatagggacgacagagaagagtccaagaagtcccgg
aaacatggaagtgaccgcaaaaaatcaagaaagcatggacactcgccccaatcagacagt
gaaagtaggcataaaagacacaagaaggattatcgggacacttcccgtagaagcggtaat
gacgagcttgaggatggagaggttggtgaagatggggaaatccagtaa
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