Tarenaya hassleriana (spider flower): 104808282
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Entry
104808282 CDS
T04125
Name
(RefSeq) E3 ubiquitin protein ligase RIN2
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104808282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104808282
Enzymes [BR:
thj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
104808282
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104808282
Multi subunit type E3
ERAD complex
104808282
LMBR1L-GP78-UBAC2 complex
104808282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_11
zf-C3HC4_4
zf-RING_16
zf-RING_5
E3_UbLigase_EDD
RINGv
PHD
Endonuclease_7
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
104808282
NCBI-ProteinID:
XP_010532247
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MGIKYLPLSVASAAVSFVGLQVWTELSLHRLRTDGLITQNISLGDSEHALELLLGSFTTI
ALLANFALNVYILLVLSLKTLFFGDLYAVETKKLLERLANYIIYKGTFLPLVVPPTILQG
VLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSVLFLVLAVDLFWIRLSL
LIYNTNGSSMYLLLLYEPCSIAFETMQALLIHGFQLLDMWINHVAVKNSDCQRSKFLDSM
TAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMVFHLVDAVLFLNIRALLSA
ILKRIRGYIKLRVALGALHAALPDATCEELRAYDDDCAICREPMAKAKRLHCNHLFHLSC
LRSWLDQGLNEAYSCPTCRKPLFVGRTESEANPSTGEVSTDEQLARQIDRQNNSEHAIAT
GLFPTEMPNSVESDSWGNSGLDPSLLQTWSGHGVDGAGPSTATGSVGLGRVQMMMRHLAS
VGESYAQTALEDAAWGLWPVNPSQASTSSTSAPPGVSGRTAGLHLRTASHTVNDNMANIL
AMAETVREVLPHVPDEIIFQDLQRTNSVAVTVNNLLQM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgggtataaaatatttgcccctttcggtagcatcagcggctgtgagctttgtcggcctt
caagtttggacagagttgtctttgcacagacttaggacagatgggctaatcacccagaat
atttctttaggggattccgagcatgcccttgaactgcttctgggttctttcacaacaatt
gcattgcttgcaaatttcgctctcaatgtatatattcttctggttctttctctcaagact
ctatttttcggagatttgtatgccgttgaaactaaaaagttactggagcgccttgcgaat
tacattatttacaagggtaccttcctgccactagttgttccaccaacaatattgcagggg
gtcctatggacggtctggctgactgtcctgtgcactctaaagatgtttcaagctttggct
agagatcggcttgagcgattaaatgcatctccatcttctacaccttggacatactttcgt
gtgtattcagtgttgttcctggttctcgctgttgatctcttctggataaggctgtcttta
ttgatatacaatacaaatggctcatctatgtacctgttattactttatgagccatgcagt
atagcgtttgagaccatgcaggcactgttaattcatgggtttcagctgcttgatatgtgg
atcaaccatgtagcagtcaagaattcagactgccaaagatctaagtttcttgattctatg
acagcaggctcactgttggaatggaaaggcctcctcaaccgaaaccttggtttcttcttg
gacatggccactttggtaatggcacttggccattatttgcacatctggtggcttcatggc
atggtttttcatttggtggatgcagttttgtttctcaatatccgtgccttgcttagtgcg
attttaaaacgtataagaggatacatcaaacttagagtagctctaggggcactccatgca
gcacttcctgacgcaacttgcgaagaactacgtgcatatgatgatgattgtgctatatgc
cgggagcctatggcgaaggctaaaaggcttcactgtaatcacctttttcatctttcatgc
ctgcgatcctggttggatcaaggtctaaatgaggcatactcatgtcctacatgccgtaag
cctctttttgttggtagaactgaaagtgaagcaaacccttccacaggggaagtctcaact
gatgagcagttagctcgtcagattgacagacaaaacaattctgaacatgccatagctact
ggattatttcctacggagatgccaaattctgttgaaagtgattcttgggggaattcagga
ctggatccaagcttgctgcaaacatggtcgggtcatggtgttgatggagctggtccctcc
acagccaccggatccgtggggcttggacgtgttcagatgatgatgagacatcttgcatca
gtcggggaaagttatgctcaaactgcacttgaagatgctgcttggggtctttggccagtg
aatccttcccaagcatcaacttcttctacatccgctcctcctggtgtcagtggaagaact
gctggtctgcatctgagaactgcctcccatacggtgaatgacaacatggcgaatatacta
gctatggccgagacagtgagggaagtcctgccacatgtgccggatgaaataattttccag
gacctgcagagaacaaattctgttgcagttacagtgaacaatcttctccagatgtga
DBGET
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