Tarenaya hassleriana (spider flower): 104808528
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Entry
104808528 CDS
T04125
Name
(RefSeq) uncharacterized protein LOC104808528
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104808528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104808528
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104808528
mRNA degradation factors
5'-3' decay
Decapping complex
104808528
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
104808528
NCBI-ProteinID:
XP_010532520
LinkDB
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Position
Unknown
AA seq
785 aa
AA seq
DB search
MERSDSRGSYDFSRASSDAALFDASQYEFFGQNVVEEVELGGLEDEEAKAAVLGYADEDA
YHLFDKGEGTGLGSLSDMDDLATTFAKLNRVVTGPKHPGVIGDRGSGSFSRESSSATDWT
QDAELSSWLDQHMLDVQAQEAKRWSSQPQSSERSKPLCRTSSYPKQQPQLHHYNSEPIIV
PESTFTSFPPPGSRSQQASSSHLHRAPSLPGTAQLALSAPNVSPLSSSNLHVTGLSNVPH
YGGNLARFASGGPTLSNMVQHHWFSDSGLLHRDHSGLLHSLVQQQQPHLPPRNGLLSPHL
ISLPQRQSLAHLAAFQSQLYNSYPSPSRKAPFGAGEGREHKHRSSHRSRKNRGISQQASD
ISSQKSEGGLQFSSKYMTSEEIESILKMQHSNSHSNDPYVNDYYHQARLAKKSVGSREKP
HFYPSHLKEHQSRSRNSTEQHPQVHIDALGKITLPSVRRPLALVEVDSPRGSSEGSSDHK
DSEKHLDQEPLVAARVTIEDALGVLIDIDDIDRILQFNRPQDGGAQLRRKRHILLEGLAT
SLQLIDPFSKTGQRAVLTAKDDIIFLRIATLPKGRKMLTKYLQLLVPGSEVARIVCMAVF
RHLRFLFGGLPSDTAVAETISKLAKAVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGS
PAGDGASLVLISLLERAAEVLVPHVNHTNHNDGLWRASFDEFFTLLTKYCRSKYETIRSQ
NQGSADIMELAIKREMPAELLRASLRHTSEVQRNYLLNFGRKPSPVGESSSHARGGQINS
ETVRV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggagagatccgattccaggggttcctacgacttttctcgggcttcctcagatgctgca
ctatttgatgcatcccaatatgagttttttggtcaaaatgttgtggaggaagtggaactg
ggggggctcgaggacgaagaggcgaaggctgctgttctgggatatgctgatgaggatgcg
tatcacttgtttgataaaggagagggtactgggttagggtctttgtctgacatggacgat
ctcgcgaccactttcgcaaagttgaacagggttgttactggacccaaacatcctggagtt
attggtgatagaggatcaggatccttctcaagggaaagttcatctgctacagattggacg
caagatgcagagctttcaagctggttggatcagcatatgctagacgtacaagctcaggaa
gctaagagatggtcctcacagcctcaatcatccgagcgttcgaaacctttgtgcaggaca
tcctcttatcctaagcagcaaccgcagctgcatcactataacagcgaacccattattgta
ccagaatcaactttcacatcttttccacctcctggtagccgatctcagcaggcttcatcc
agccatctgcatcgtgctccttctcttcctgggacagcccagttggccttatctgcacca
aatgtttctccactgtcaagttctaatcttcatgtaacgggattgtcaaatgtcccccac
tatggtggtaatctggcaagatttgcatctggtggacccacacttagtaacatggtgcaa
catcattggttcagtgactctggcctcctacacagggatcattctggactattacatagt
ctggtgcaacaacagcaaccccacttgcccccacgcaacggtcttctgtcaccacatttg
atttcccttccgcagagacaatccctagcccatcttgccgcctttcaatcccagctgtat
aattcatatccttctccgtcacgtaaagcgccatttggggctggtgaaggtcgggagcat
aaacataggtcatctcacagaagccgaaagaacagaggcatctcccaacaggcgtcggat
atatctagtcagaaaagtgagggtggattgcagtttagctcaaagtacatgacttcggaa
gaaatagagagtattctcaaaatgcagcattccaattcacacagcaatgatccttatgtc
aatgattattaccaccaagctcggcttgctaagaagtctgttggatcaagggaaaaacct
cacttctatccttctcacctgaaggagcaccaatctcggtcccgtaatagtactgagcag
cacccacaagttcacatcgatgctcttgggaagattacccttccttccgttcgtaggccg
ttggccctagttgaggtcgactctcctcgtgggtctagtgagggaagctcagatcataag
gactctgaaaagcatttggatcaggaacctctggttgctgctagggttactattgaagac
gctcttggagttctcattgacatagatgacatcgataggattttgcaatttaatcggccc
caggacggaggtgctcaactcaggagaaagaggcatattctgctggaaggcttagcaaca
tcacttcaacttattgatccattcagcaaaactggtcagagagctgtgttgaccgcaaag
gatgatatcatttttctacggattgcgactcttcccaagggtcggaaaatgcttacaaag
tatttgcagcttcttgtccctggtagtgaggttgcccggattgtttgtatggctgttttc
cgccacttgagatttctgttcggtggccttccctcagacacagcagtagcagagacaatt
tcaaaacttgccaaggcggtaacggtgtgcgttcaagccatggatctcagggcactgagt
gcttgccttgcagcagtagtttgttcctcagagcagccgcctctccgtcccatcggaagc
cctgctggggatggtgcttctctcgtcttgatatctcttcttgagagggctgctgaagta
ctcgttcctcatgtgaatcacactaatcataacgacggactgtggagggcctcgtttgat
gaatttttcacacttctcaccaagtactgcaggagtaaatacgagacaatccgcagtcag
aaccaggggagtgcagatattatggagttagccataaagagggagatgcctgcagagctt
ttacgggcaagtctccgtcataccagtgaagtccagagaaactatttactgaactttggc
cgtaaaccatcacccgttggcgagtcctcatcccatgcaaggggcggccagatcaactct
gaaaccgtgagggtttaa
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