Tarenaya hassleriana (spider flower): 104808585
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Entry
104808585 CDS
T04125
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104808585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thj03009
]
104808585
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
Pre-60S particles
GTPases
104808585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
GTP_EFTU_D2
EFG_III
SRPRB
EFG_IV
Motif
Other DBs
NCBI-GeneID:
104808585
NCBI-ProteinID:
XP_010532594
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MHDSDTTKLRNICILAHVDHGKTTLADHLIAASGGGVIHPKLAGKLRYMDYLDEEQRRAI
TMKSSSIALHYKDYFINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIERLTPCLVLNKIDRLICELRLSPMEAYTRLLRIVHEVNGIVSAYKAEKYLSDVDSI
LAGPSGELTDENLELLEDDEEDTFQPQKGNVVFVCALDGWGFSIHEFADFYASKLGASAA
ALQRSLWGPRYYLPKSKMIVGKKGLSAGSKARPMFVQFVLEPLWQVYQAALEPDGDRAML
EKVIKSFNLSIPPRELQNKDPKNVLQSVMSRWLPMSDAVLSMVVKHLPDPIAAQSYRISR
LVPKRQIIGGDVDSDILEEAERVRKSVEGCDSRCEAPCVAFVSKMFAVPMKMIPQTANHR
EISSGLNDEDTKIESDECFLAFVRVFSGVLSAGQRVFVLSALYDPLKGELSQKYVQEAEL
QSLYLMMGQGLKPVTEAKAGNIVAIRGLGPYISKSATISSTRNCWPFSSMEFQVSPTLRV
AIEPSDPADMAAXNRADPFVEVTVSSRGEHVLAAAGEVHLERCVKDLKERFAKVNLEVSP
PLVSYRETIEGNGYNLSESLKSLSLSSDFAEKVTPNGRCIIQVRVMKLPPGLTKVLDENS
ELIGDIIGGKGGQSVKIIDGPQTLSTGDDMDPVEAFKKLLMEAIDNDISSDAAEMDKDLS
EKCKAEWKKLLERIWALGPRQIGPNILFTPDSKRTATDTEESIVVRGSPHVSQRLGFVEE
TILASEAPLEKTRTLYREAQSLESSIVSGFQLATASGPLCDEAMWGLGFTIQAQVSSPPL
TEESEANPQPENFGIFTGQVMTAVKDACRAALLQKQPRLVEAMYFCELNTPPEYLGPMYA
VLSRRRARVLKEEMQEGSPLFTVHAYVPVSESFGFADELRKGTSGAASALMVLSHWEMIQ
EDPFFVPKTEEELEEFGDGASVLPNTARKLINGVRRRKGLHVEEKVVQHATKQRTLARKV
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactctgatactacgaaacttaggaacatatgtatcttggcacatgttgatcat
ggtaagacaacactcgctgatcaccttattgctgcctcgggtggcggtgtgattcatccg
aaattagccggtaagcttcggtatatggattatctcgatgaagaacagagacgggccatc
acgatgaagagctcttctattgctctccattacaaggactacttcattaacttgatagac
tccccaggccatatggacttctgtagtgaggtctctacagctgcccgactcagcgatggg
gcattggttttggtcgatgccgtcgagggcgttcacattcagacacatgctgtgttgcgt
caagcttggattgagaggctgaccccttgtttggttcttaacaaaattgatcggttgatt
tgcgagttgagattgagcccgatggaggcatatacccgtttgttgaggatcgttcacgag
gttaatgggatagtgagtgcgtataaggcagagaagtatctgtcggatgtcgattctata
cttgctggtccttcgggtgagctgactgatgagaatctcgagttgttggaagatgatgaa
gaagatacttttcagcctcagaagggtaatgtggtgtttgtttgtgcattagacggctgg
ggtttcagcattcatgagtttgcagatttttacgcttccaagctcggtgctagtgctgct
gcattgcagagatctttgtggggtccacgttattatcttccgaagtccaagatgattgta
gggaagaaaggtttaagtgccggaagcaaagcaagaccgatgttcgtgcagtttgtgctt
gaaccgttgtggcaggtgtaccaggctgctctcgagccagatggggaccgagccatgctt
gagaaagttataaagtcctttaatttgtccataccacctcgtgaacttcagaacaaggat
ccgaaaaacgtgcttcaatcagtcatgagccgttggcttcctatgtctgatgctgtcctg
tctatggtggtcaagcatctgccagatcccattgccgcccaatcgtatagaatttctcgg
ttggtcccgaaaagacagattatcggcggcgatgttgattctgacatccttgaagaggcg
gaacgtgttagaaaatcagtagagggttgtgattctaggtgtgaagccccttgcgttgca
tttgtatctaaaatgtttgctgtcccgatgaaaatgattcctcaaactgcaaaccacagg
gagatatcgagcggtttgaacgatgaagatactaaaatcgagtcggatgagtgcttcctt
gcatttgtgagggtcttcagtggtgttctctctgcaggacagcgggtctttgtgctttca
gcgttatatgatcctctcaaaggcgagttatctcagaaatacgttcaagaagcggaactt
cagtccctatatctaatgatgggccaaggtttgaaaccggttacagaggcaaaggcaggg
aatattgtggccatcagagggctcgggccatatatatcaaaatctgcaacaatttcttca
actcgaaactgttggcctttctcaagcatggagtttcaagtttctcccaccctacgagta
gcgatagaaccttctgatccggcagatatggctgctncgaaccgagctgacccttttgtg
gaggtaacggtatcttccagaggagaacacgttcttgccgccgctggggaagttcatcta
gaaagatgcgtaaaggatttgaaggaaaggtttgcgaaagtgaaccttgaagtgtcaccg
cctctcgtatcctacagggagactatagaggggaacggatacaatctatcggaaagcttg
aaatcgctcagtttaagctcggattttgctgagaaggtaactccaaacggtagatgcatt
atccaagtacgagtcatgaaactgcctccgggtctaactaaggttcttgacgagaattct
gaattgatcggagacataatcggaggaaagggtggtcagagtgttaagataatagacggg
ccacaaactctgagcaccggagatgacatggatccggttgaagctttcaagaaactgtta
atggaagccattgataacgacatctcgtctgatgctgctgagatggacaaggatctgtcc
gagaaatgtaaagctgaatggaagaagctgctcgagaggatttgggcacttgggccaaga
caaataggacctaacatcctcttcactcccgacagcaaacgaactgccaccgacacagag
gaatccattgtcgtgagaggttctcctcatgtttctcagaggctagggtttgtagaagag
actatcctggcatctgaggcaccattagagaagacacggacactgtacagagaagcacag
tcactcgagagcagtatcgtatctgggtttcagctagcgacagcatccggaccgttatgc
gacgaagccatgtggggattagggttcaccattcaagcacaggtttcttctcctccactc
accgaagaatctgaagcaaacccgcaaccagaaaacttcgggatattcacgggacaagtc
atgacggcggtgaaagacgcctgccgagctgcattgctccagaaacaaccacgtctggtc
gaagccatgtacttctgcgaactgaacaccccgccagagtatctcggcccaatgtacgcg
gttctcagccggagacgggccagggttctcaaggaagagatgcaagaagggtcgccgctt
ttcacggtccatgcctacgtgccggtctcggagagctttgggtttgcggacgagctgcga
aagggaacgtcaggggctgcgagtgcgctcatggttctgagccactgggaaatgattcag
gaggatccgttcttcgtgccgaagaccgaagaagagctcgaagagtttggggatggagcc
agtgttcttcccaacacggccaggaagctcatcaatggcgtgaggcggaggaaagggctt
cacgtggaggagaaggtggttcaacacgctaccaagcagcggaccttggctcgtaaagtt
tga
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integrated database retrieval system
