KEGG   Tarenaya hassleriana (spider flower): 104809417
Entry
104809417         CDS       T04125                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03030  DNA replication
thj03410  Base excision repair
thj03420  Nucleotide excision repair
thj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104809417
   03410 Base excision repair
    104809417
   03420 Nucleotide excision repair
    104809417
   03430 Mismatch repair
    104809417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thj03032]
    104809417
   03036 Chromosome and associated proteins [BR:thj03036]
    104809417
   03400 DNA repair and recombination proteins [BR:thj03400]
    104809417
DNA replication proteins [BR:thj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104809417
  DNA Replication Termination Factors
   ELG1-RFC complex
    104809417
Chromosome and associated proteins [BR:thj03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104809417
DNA repair and recombination proteins [BR:thj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104809417
  Check point factors
   HRAD17(Rad24)-RFC complex
    104809417
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Rad17 AAA_16 Mg_chelatase Viral_helicase1 RuvB_N nSTAND3 AAA_11 RCF1-5-like_lid AAA_5 AAA_24 AAA_28 AAA_19 AAA_assoc_2 AAA_30 MeaB AAA_25 DNAX_ATPase_lid bpMoxR AAA_18 AAA_3 ABC_tran RNA_helicase IstB_IS21 KTI12 NTPase_1 AAA_7 SLFN-g3_helicase T2SSE NPHP3_N AAA_29 DNA_pol3_gamma3 DO-GTPase1
Other DBs
NCBI-GeneID: 104809417
NCBI-ProteinID: XP_010533710
LinkDB
Position
Unknown
AA seq 333 aa
MASSSSTGVGGSYDMPWVEKYRPSKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTG
KTTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD
EADSMTSGAQQALRRTMEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQEILGR
LMVVVQAEHVPYLPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPL
HIKNMVRNVLEGKFDGACQGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG
FAHMRICDGVGSYLQLCGLLAKLALVRETAKAA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcgtcttcgtcttcaaccggcgtcggaggcagttacgacatgccgtgggtagagaaa
tacaggccgagcaaggtcgccgatatcgttggaaatgaagacaccgtctctcgtcttcaa
gtcatcgctcgcgacggaaacatgcctaatcttatcctttcgggtcctcccggaactggt
aagaccacaagcatactggctcttgctcatgagcttcttggcccaaattatagggaggct
gttctggagctgaacgcgtctgatgacaggggtatcgatgttgttaggaacaagattaag
atgtttgctcagaagaaagtgactcttcccccgggccgtcataaggttgtcattttagat
gaagctgacagcatgacatctggagcacaacaagccctgaggagaacgatggaaatatat
tcaaactctactcgttttgctcttgcgtgcaatacatctgccaagattattgaacctatc
cagagtagatgtgccctagtccgattctctagattgtctgatcaagagatacttggccgt
ctcatggtggtggttcaagcagagcatgttccttatctaccagaaggcctcgaagcaatt
atattcactgctgatggtgacatgagacaagctctgaacaacttgcaagccacaaacagt
ggttttcgatttgtcaaccaagaaaacgtcttcaaggtctgtgaccagcctcacccgctt
cacatcaaaaacatggttaggaatgtattggaaggaaagtttgacggcgcttgtcaaggt
ctgaagcagctctatgatcttggctactccccaaccgatatcatcacgacccttttccgc
atcataaagaactacgatatggctgagtatctgaaattagagttcatgaaggaaaccggg
tttgctcatatgagaatctgtgatggcgtcgggtcgtatcttcagctatgcggccttctt
gctaagctagcccttgttcgtgaaaccgctaaagcagcctag

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