Tarenaya hassleriana (spider flower): 104809417
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Entry
104809417 CDS
T04125
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03030
DNA replication
thj03410
Base excision repair
thj03420
Nucleotide excision repair
thj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104809417
03410 Base excision repair
104809417
03420 Nucleotide excision repair
104809417
03430 Mismatch repair
104809417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thj03032
]
104809417
03036 Chromosome and associated proteins [BR:
thj03036
]
104809417
03400 DNA repair and recombination proteins [BR:
thj03400
]
104809417
DNA replication proteins [BR:
thj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104809417
DNA Replication Termination Factors
ELG1-RFC complex
104809417
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104809417
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104809417
Check point factors
HRAD17(Rad24)-RFC complex
104809417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Rad17
AAA_16
Mg_chelatase
Viral_helicase1
RuvB_N
nSTAND3
AAA_11
RCF1-5-like_lid
AAA_5
AAA_24
AAA_28
AAA_19
AAA_assoc_2
AAA_30
MeaB
AAA_25
DNAX_ATPase_lid
bpMoxR
AAA_18
AAA_3
ABC_tran
RNA_helicase
IstB_IS21
KTI12
NTPase_1
AAA_7
SLFN-g3_helicase
T2SSE
NPHP3_N
AAA_29
DNA_pol3_gamma3
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
104809417
NCBI-ProteinID:
XP_010533710
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MASSSSTGVGGSYDMPWVEKYRPSKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTG
KTTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD
EADSMTSGAQQALRRTMEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQEILGR
LMVVVQAEHVPYLPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPL
HIKNMVRNVLEGKFDGACQGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG
FAHMRICDGVGSYLQLCGLLAKLALVRETAKAA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcgtcttcaaccggcgtcggaggcagttacgacatgccgtgggtagagaaa
tacaggccgagcaaggtcgccgatatcgttggaaatgaagacaccgtctctcgtcttcaa
gtcatcgctcgcgacggaaacatgcctaatcttatcctttcgggtcctcccggaactggt
aagaccacaagcatactggctcttgctcatgagcttcttggcccaaattatagggaggct
gttctggagctgaacgcgtctgatgacaggggtatcgatgttgttaggaacaagattaag
atgtttgctcagaagaaagtgactcttcccccgggccgtcataaggttgtcattttagat
gaagctgacagcatgacatctggagcacaacaagccctgaggagaacgatggaaatatat
tcaaactctactcgttttgctcttgcgtgcaatacatctgccaagattattgaacctatc
cagagtagatgtgccctagtccgattctctagattgtctgatcaagagatacttggccgt
ctcatggtggtggttcaagcagagcatgttccttatctaccagaaggcctcgaagcaatt
atattcactgctgatggtgacatgagacaagctctgaacaacttgcaagccacaaacagt
ggttttcgatttgtcaaccaagaaaacgtcttcaaggtctgtgaccagcctcacccgctt
cacatcaaaaacatggttaggaatgtattggaaggaaagtttgacggcgcttgtcaaggt
ctgaagcagctctatgatcttggctactccccaaccgatatcatcacgacccttttccgc
atcataaagaactacgatatggctgagtatctgaaattagagttcatgaaggaaaccggg
tttgctcatatgagaatctgtgatggcgtcgggtcgtatcttcagctatgcggccttctt
gctaagctagcccttgttcgtgaaaccgctaaagcagcctag
DBGET
integrated database retrieval system