Tarenaya hassleriana (spider flower): 104809610
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Entry
104809610 CDS
T04125
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03440
Homologous recombination
thj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104809610
03460 Fanconi anemia pathway
104809610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thj03032
]
104809610
03400 DNA repair and recombination proteins [BR:
thj03400
]
104809610
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104809610
DNA replication proteins [BR:
thj03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104809610
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104809610
Bloom's syndrome complex (BTR)
104809610
FA (Fanconi anemia) pathway
104809610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
FlxA
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
104809610
NCBI-ProteinID:
XP_010533953
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MNNEKKMSVCHLPEGREPSSHFPQTNWSEHTKTLSSNFLYSLESQKPVRDQDMVTRSIAF
RTLNIQNLQLPQVERAWHSLSNLSMSNTYLRPGITPPIIDDITSSNAARGRYTAKVISEA
GGTFNAHSHQDHSHMQMRGTAKSFDSFSPPDDDIVMAGKVANGDNKVRASVTSCKYLNGM
DKSFGNPSFPTEHMKSSEAFPDEIDDDDILKTIDVDRIVMEHYQSTSTPQPSFNRNIPPE
EGKTSLPPELCSSCDHGNKVGHCSEASTHIEQMKDRLLVISNELLDNAADLSPDHSEKLR
QERLLLKKQIQLLEIHIQDIERQKSQFLASTATQNFQYETPRRPDFTVDHVHRDAQKHSG
EQGKYAHDNWYMPSDSFSADRYGPSSGLIEREQYIPKIIDVNYIEGSNDKKWSSRDFPWT
KKLEVNNKKVFGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALICAGITLV
ISPLVSLIQDQIMNLLQTNITAAYLSASMEWAEQLEILRELGSDHSKYKLLYVTPEKVAK
SDSLLRHLESLNARSLLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNVPMLALTAT
ATASVKEDVVQALGLVNCVVFRQSFNRPNLRYCVVSKTKKCLEDIDKFIKENHFDECGII
YCLSRMDCEKVAERLQEFGHKATYYHGSMDPSQRAFVQKQWSKDEINIICATVAFGMGIN
KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQWSSCVLYYSYSDYIRVKHMISQGGVEQSA
MTTGYNRASSSGRILETNTENLLRMVSYCENEVDCRRFLQLVHFGEKFDSANCQRTCDNC
CSGKKLIDKDVTMIARQLVELVQLTGERFSSAHILEVFRGSLSQMVKKHRHETLRLHGAG
KQLAKSEASRILHYLVTEDILVEGVRKSDLYGSVSSLLKVVNKSKAQSYFSEGRTITMRF
PSAAKVSKSGATPAKGPLISGKQSALPMTDVPSQPKSKEDLNLSANLYSALRKLRTILVK
EAPEGVMAYHIFGNATLQQISRRVPRTKEELLEINGLGKAKVSKYGDRLLETIESTIKEY
YGTGRNESPDSGKRRRDENVSPNVTEDGDFTESPAALSYKRASRNKSNVVYDERVDDEGM
DNCDVDENVSEVRPEGRVLPW
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgagaagaagatgagtgtgtgccatctccctgaaggccgagaacccagcagc
cattttcctcaaacaaattggtcggagcataccaagacactcagctccaatttcctttac
tctctagaaagtcaaaagcctgtaagagatcaagacatggttacaaggtctatcgccttt
cgtacgttgaatattcaaaatttgcagctcccacaagttgaaagggcttggcattctctt
tcaaatctatcgatgagtaatacctacctgagacctggaataactcccccaatcattgat
gacatcactagttcaaatgctgcaagaggaagatacactgccaaagttatatctgaggct
ggtggaacgtttaatgcgcacagtcatcaagaccatagtcacatgcaaatgaggggaact
gcaaaatcttttgacagtttcagtccgcctgatgatgatatagtaatggctggaaaggtt
gcaaatggggacaataaggttagagcttcagttaccagttgtaagtatttaaatggaatg
gataagtcattcgggaacccttcattcccaactgagcatatgaaatctagcgaagctttt
cctgatgagattgatgacgatgacatactcaagactattgatgtggaccgaattgtcatg
gaacattaccaatcaacaagtactcctcaaccatctttcaatagaaatattcccccggaa
gaaggaaagactagtttgcctcctgaattatgttccagctgtgatcatggaaataaggta
gggcattgttcagaagcctcaactcacatagaacagatgaaggacaggttacttgtgata
tcaaatgaactgcttgataatgctgctgacctgagtcctgatcattcagaaaagcttcgt
caggagaggttactgctgaaaaagcaaattcagctgcttgagatccatatccaggatata
gaaaggcagaagtctcagtttttggcatctacagcaactcagaattttcagtacgaaaca
cctagaagaccagatttcactgtggatcatgtgcatagggatgcccagaaacattctggt
gaacaaggaaaatatgcacatgataactggtacatgcctagcgattctttttctgctgat
aggtatggtccttcatctggtcttatagagagggagcaatatattcctaagattattgat
gtgaattacattgagggctcaaacgataagaagtggagcagtcgtgattttccttggacc
aaaaagctggaggtcaataataaaaaagtatttggaaatcactcatttcggcccaatcaa
agagagatcattaatgctacaatgagtgggtgtgatgttttcgttttgatgccaaccgga
gggggaaaaagtttgacctatcagctccctgcactgatctgtgcgggtataacattagtc
atttctccacttgtatcacttattcaagaccagataatgaacctattgcagaccaatata
actgctgcttacctaagtgccagcatggagtgggctgaacaactggagatccttagggag
ttgggctccgatcactctaaatacaagttactatatgttacgcctgaaaaagtggcaaaa
agtgattctcttttgaggcacctagaaagcttaaatgcccgtagtttgcttgctcggatt
gttattgatgaggctcactgtgtgagccagtggggacatgactttcgaccagactaccag
ggtctaggtattttgaagcagaagttccctaatgttcctatgttagctctaacagctaca
gcaacagctagtgtaaaagaagatgttgtgcaagctcttggccttgttaactgtgtcgtg
tttcgacagagtttcaatcgcccaaatctacggtattgtgttgtttccaagacaaaaaag
tgtctggaagatatagacaagtttattaaagaaaaccattttgatgaatgcggaattatt
tattgtctttcaagaatggactgcgagaaagttgctgaaaggctgcaggagtttggccat
aaagcaacatactaccatggtagcatggatcctagccaacgtgcctttgtgcaaaagcaa
tggagcaaggatgaaataaacataatatgtgccacagtggcatttggcatgggaattaac
aagccggatgttcgctttgttattcaccattctctcccgaagtcaatagaaggctatcat
caggaatgtggtcgtgctggtagggacggtcagtggtcatcgtgcgttttgtattacagt
tacagtgactatatacgggttaagcatatgattagccaaggaggagttgagcaaagcgcc
atgacaaccgggtataatcgtgcatcaagttcaggaaggatactcgaaacgaatactgaa
aatcttcttcgcatggttagttactgcgaaaatgaggtggactgtcggcgttttctacag
cttgtgcacttcggggaaaaatttgattctgcaaactgccaaagaacatgtgataattgt
tgcagtggcaaaaaattaattgacaaggatgtcacaatgattgcaaggcaattggttgaa
ttggtgcagctaacaggggaaaggttttcttcagctcatattctagaagtcttcaggggt
tccttaagtcaaatggtcaagaaacacagacacgaaaccttgcgcctccatggagctgga
aaacaattagctaaaagtgaagcttctcgtatcttgcattatctggtgacagaggatatt
ctagttgaaggtgttaggaaaagtgatctgtatggatctgtatcttccttactgaaggtg
gtgaataaatcaaaggctcagtcatacttttccgaagggcggactataacgatgagattc
ccttcggcggcaaaggttagcaaatctggagcgactccagctaaaggaccactaatatct
ggaaagcaaagcgctctcccgatgacagatgttccttcacaaccaaaatcgaaagaagat
ttgaatctctctgccaacttgtactcggctttgagaaagcttcgtacaattctcgttaag
gaagcccccgagggcgtcatggcataccatatatttggcaatgcgacgctgcagcagata
agtagaagagttcccagaaccaaagaagaactacttgagatcaatggccttgggaaggct
aaagtaagcaagtatggtgatcggttgttggaaactatagaatcaaccatcaaggagtac
tatggaaccggtaggaacgagagtccggattcagggaagaggcgaagagatgaaaatgtg
agccctaacgtgacggaggacggtgatttcacagagagcccagcagcattgtcctacaaa
agagcatccaggaacaaaagcaatgtggtttatgatgaacgtgtggatgatgaagggatg
gataactgtgatgttgatgagaacgtgtcggaggttagaccagagggaagagttttacca
tggtga
DBGET
integrated database retrieval system
