Tarenaya hassleriana (spider flower): 104809900
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Entry
104809900 CDS
T04125
Name
(RefSeq) protein CHROMATIN REMODELING 25 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104809900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thj03400
]
104809900
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104809900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
SLFN-g3_helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
104809900
NCBI-ProteinID:
XP_010534307
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MEDEDDEEISTSSDSGDSTEDFDVDPDDSAGENESSDEIAESESLAAVSPPSNADRKSKN
VDELIRGNLVVWRQPLLPRVLYVSEGAAVCRKPFKPPCPSGYSTTNGQLARRLWARKRFV
PWGSSAPVEVAISFKSNVPAEIEKDEEEEILPLPPGIDPLILWPPEEPEDGVSNLTAISV
DPLLVRFLRPHQREGVQFMFDCVSGLYESANINGCILADDMGLGKTLQSITLLYTLIRQG
FDGKPMVKKAVIVTPTSLVSNWEAEIKKWVGERIQLIALCESTKDDVVSGIDSFTRPRSS
LQCQQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALAALPCKRRILL
SGTPMQNDLEEFFAMVNFTNPGILGDATHFRRYYESPIIMGREPTATVEEKKLATDRSAE
LSSKVNQFILRRTNTLLSNHLPPKIIEVVCCKMTPLQSNMYNHFISSKNLKRAIADKAKQ
SKVLAYITALKKLCNHPKLIYDTIKTGSSGTMGFEDCLKFFPPEMFSGRSGTWTGGDGAW
VELSGKMHVLARLLANLRQRTDDRIVLVSNYTQTLDLFSQLCRERRYPYLRLDGTTTISK
RQKLVNRFNDPSKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARIWRDG
QKKRVFVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEHTDTIVRQGNFLSAEDLRDLFSF
HENVRSEIHENMSCSRCQNLDHDIGSFNKRNDSKLDNNTCQTDGDDIGGFAEIAGCLNEL
KCSEKQVGTPLEEDLTSWGHHFASKSVPDTILQASAGDEVTFVFTNQVDGKLVPIQSNVG
TKTQEHGKLKPNITIMGGGSSKFQRVREPLQPLSLNETVKRVKLSAYKLPLNRINLVPLR
TPNLDSVSHDDDFV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaagacgacgaagagatctctacctcctccgattccggtgattcgaccgaa
gattttgacgtcgatcccgatgattccgccggtgagaacgaaagttccgacgaaatcgct
gaatcggaatctctcgcggcggtttctccgccatccaacgccgaccggaaatcgaagaac
gtagatgaactcatcagaggtaacctggtcgtgtggaggcaaccgcttctccctagggtg
ctttatgtttcggaaggcgctgcagtttgtaggaagcccttcaagcctccatgtcccagt
ggttacagtactaccaatggacaacttgctcgtcgcctttgggctcgcaaacggtttgtg
ccttggggttcttcagcaccggtggaggtcgcaatatcttttaagtctaatgtaccagct
gaaattgagaaagatgaggaagaggaaatattgcctctgccccctggtattgatcccttg
atattatggccacctgaagaacctgaggatggagtgagcaatttaacagctatatcagtg
gatccgttgcttgtccgttttcttcgtcctcatcagagagaaggagtccaattcatgttt
gattgcgtttcgggattgtacgagtcagcaaatataaatggatgtattctggctgatgat
atgggtttgggaaagacattgcagtccattacattactatacactcttatacgtcaaggg
tttgatgggaagcctatggttaagaaagccgttattgttacaccaacgagtcttgtaagc
aactgggaagctgaaattaagaaatgggttggagaaaggattcagcttatagccctctgc
gaaagcactaaggatgatgttgtatctggaattgacagtttcactcgaccccgaagctct
ttacagtgtcaacaggtacttatcatctcttacgagacatttcgaatgcattcatccaag
ttttgccaaagtgaatcctgtgatcttctaatatgtgatgaggcgcataggctgaagaat
gaccagacactaacaaacagggccttggctgccttgccatgcaaacgccggattttattg
tctggaactcccatgcagaatgatttggaagaattttttgccatggtcaacttcacgaat
ccaggaattttaggtgatgctacacactttcgccgttattatgagtcaccgattattatg
ggaagagaacctacagctactgtggaagagaaaaaattagcaacagatcgctctgctgag
ctaagttcaaaagtcaatcagtttattttgaggagaacaaatacattgctttcaaatcac
ttgccgcctaagataattgaagtggtttgttgcaagatgacacctctccaatctaacatg
tacaatcattttataagctcaaaaaatcttaaaagggcaattgctgataaagcaaagcaa
tcgaaagtgttggcttatattacagctctcaagaagctctgcaatcatccaaagctaatc
tatgacacaattaagaccggcagctctggaactatgggatttgaggattgcttaaagttt
ttccctccagaaatgttctcggggagatctggtacatggactggtggtgatggtgcttgg
gtcgagctttctgggaaaatgcatgttttagcccggttacttgccaacctacgccagaga
actgatgaccgtatagtccttgtctcaaactatactcagacactggatcttttttcgcaa
ctttgccgtgaaaggagatacccttatcttaggctggacggaacgacaacaataagcaag
aggcaaaaacttgttaaccggttcaatgacccgtcgaaggacgagtttgcgtttctatta
agcagcaaggcaggtggttgcggcctaaatctaataggtgctaatcgacttgttctcttt
gatcccgattggaatcccgccaatgataaacaagctgctgctagaatctggagagatgga
caaaagaagagagtctttgtctacagatttctgagtactggaactatagaagaaaaggtt
taccagcgtcagatgtcaaaagaagggcttcaaaaagttattcagcatgaacatacagat
accatagtgagacaggggaactttctctctgccgaggacttgcgagatttattctctttc
catgagaatgttagatctgaaatccatgaaaacatgagctgctcgaggtgccaaaatctt
gatcatgatatcgggagtttcaacaagagaaacgacagcaaactcgataacaacacatgt
cagaccgatggagacgatataggtggtttcgcggaaattgcagggtgcttgaatgagtta
aaatgctccgagaaacaggtgggaactccattggaggaggatctaactagctggggccat
catttcgcctccaaatcagttcccgacactatattgcaagcatcagctggtgacgaggtg
acatttgtattcacaaatcaggtagacggaaaactcgtaccgatccaatcaaatgtcggt
accaagactcaggaacacggaaaactgaaaccgaacataactattatgggcggcggatcc
agcaagttccaacgagttagggaaccgttgcaaccattgtctcttaatgagacagtgaaa
agggtaaaactctctgcttataagctccctttgaatcgtattaatttggtaccgttgaga
acaccaaatctcgattctgttagtcacgatgatgattttgtgtga
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