Tarenaya hassleriana (spider flower): 104810297
Help
Entry
104810297 CDS
T04125
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104810297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104810297
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104810297
mRNA degradation factors
5'-3' decay
Decapping complex
104810297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
104810297
NCBI-ProteinID:
XP_010534815
LinkDB
All DBs
Position
Unknown
AA seq
1424 aa
AA seq
DB search
MVHQDIYHTICKAIILRILFLECKGSSPVSLHTLCPVVSIDSTNLSSGDLESAKPMASSP
GNTNPYPPPFDVSNFIKPSPNPYPTPPASYPPPAGPFLHNQYHQQLYMPPGISGQPSPAS
SAATQTQQEPPPASSSSAANLHPQRSLSYPTPPLNLQSPQANHNPGTQILALLNNNNGGS
GNNGATANQDPSLLLSGLHPHEIARPFPGGSVPVRAQSRKMPKGRRLVGEHAVYDVDVRL
QGEIQPQLEVTPITKYGSDPQLVVGRQIAVNKVYICYGLKGGNIRVLNINTALRSLFRGH
TQRVTDMAFFAEDVHLLASVSLEGKVFVWKISEGSEGEDQPQITGGIVLAVQILGEEDAK
HPRVCWHCHKQEILVVSIGKHLLRIDTTKVGKGVVHSAEAPLQCPLDKLIDGIQLVGKHD
GEITDLSMSQWMKTRLVSSSVDGMIKIWEDRKAQPLAVLRPHDGHPVNSATFMTAPERPD
HIILITGGSLNREMKIWVSDGEEGWLIPTDAESWKCTQTLDLQSSAAPRAEEVFFNQVIA
LSQAGLLLLANAKRNAIYVVHLGYGSCPVETRMDYLAEFTVTMPILSFTGTDDPPEEHIV
KVYCVQTQAIQQYTLDLCQCLPPPVENVGLEKSDSSVSRELNPAGGTSDASGQKPTEIPP
ADLMPKQSVQVGRSESANAIRFSGSSASIETTAQEVAPTNGEPKTSGLVSATSDTDIRYA
PSPPLPLSPRLSRKRSGCHAPGNTFESAVPQVDLGGKPPATDYSVDSQMEANVSSADDGS
RRNDDKVTHDDAFVIRNQPVVFKHPTHLVTPSEILMGVSSAEATSITEGKRDRDANVQDV
VNTDVGSAEVDVEEAGEGRSSQNDEVNYQEETENRISENIEKIFCSQASNLSTEMARDRH
AVMEESYVPEESQTRGQSSEAGEEGGRDARSASGKFPEASPSALPKPSASNNKGKKQKGK
SSHGSSLLSTSSNATSLADSYNEGQNSSLPTIESLLPQLLVMQETMNQLMSSQKEMQRQL
LNAVNGPISKEGKRLEVALGRMIEKVTKANADALWARFQEEAAKNEKRVRDHTQQIVNAM
TNFMNKELNDVFEKVVKKEFAAIGPAIVRAVTPAIEKTTLSAITESFQRGISDKAINQLD
KSVNSKLEATIARQIQAQFQTSGRQALQEALRFSLEASIIPAFEMSCKNMFEQVDSTFQK
GFGEHTGAAQQQFESAHSRLAHTLRETINSASSVAQTLNCELADGQRKLIALAAAGANPG
ATNALVTQLSNGPSGALLEKVEAPLDPTTELSRMVSERKYEEAFTSALQRSDVSIVSWLC
SQVDLHGLLAMVTIPLSQGVLLSLMQQLACDINNDTSRKLSWMTDVAAVINPGDQTIAVH
ARPILEQVYQILHHHRSTPGLTGADLSSIRLVMHVINSMLMSCK
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggttcatcaagatatataccataccatttgcaaagcaattatcttacggatcctattt
ttggaatgtaaagggtcttctccagtatctttacatacattgtgtcccgttgtatctatc
gattcaacaaaccttagctccggcgatcttgaatctgcaaaacccatggcgtcttcacct
ggtaacactaacccttaccctcctccgttcgatgtcagtaatttcatcaaaccctctcca
aacccttatcctacgcccccggcttcttatcctccacccgccggacctttccttcacaac
cagtaccaccagcagctctatatgcctcccggaatctccggtcaaccatctccggcgtcc
tccgcggcgactcagacgcaacaagagccgcctccggcttcctcctcgtccgctgctaac
ctgcacccgcagagatcgctttcgtatcctactccacctctcaaccttcaatcgcctcaa
gcgaaccacaaccctggtacgcaaatcctcgctctcctcaacaataacaatgggggaagc
ggcaacaacggcgccacggccaatcaagatccgtcgcttctactgtcgggactgcatcca
cacgagattgcacggccgttcccgggtggttcggttccagtccgtgcccagagccgcaag
atgcccaaaggaaggcgcttggtcggtgaacatgctgtgtacgatgtggacgtgagattg
cagggagagattcaaccgcaactcgaggtgactccgattaccaaatacgggtcggatccc
cagctcgtagtgggtcgacaaatcgctgtgaataaggtctatatatgctacggtctgaag
ggagggaacattcgggttctcaacataaacaccgcattgagatctttgttccgaggccat
actcagagagtaacggacatggcattctttgctgaggatgtccacctgttggctagcgtt
agcctagagggaaaagtttttgtatggaaaatttctgaggggtcagaaggagaggatcaa
ccccagattaccggaggaatagttcttgctgttcaaatactaggggaggaggatgcaaag
catccacgtgtgtgttggcactgtcacaaacaggaaattttggtggtttcaattggaaaa
catttattgcggattgatactaccaaagttggcaaaggtgtagtgcattcggcagaggca
cctcttcagtgtccccttgataagctgattgatggcatccagcttgttggcaaacatgat
ggagaaattacggatttgtcaatgtcccagtggatgaaaactcgcttggtttcttcttca
gtggatggcatgattaagatatgggaagaccgtaaagcacaaccacttgcagttttaagg
ccacatgatggccatccggtcaattcagccacattcatgacagctcctgagagacctgat
cacatcatacttatcacagggggttctctaaatcgagaaatgaaaatctgggtctcagat
ggtgaagaagggtggctcatacctactgatgctgaatcatggaagtgcacccagacactt
gacctacagagttcagctgcgccacgagctgaagaggtgtttttcaaccaagttatagca
ttgtctcaagctggcctgcttttacttgcaaatgcaaaaaggaacgccatttatgttgtg
cacttgggctatggttcttgtccagttgagacaaggatggattacttggcagaatttaca
gtcactatgcctatattgagttttacagggacagatgatcctcctgaagagcacattgtt
aaggtttactgtgttcagactcaagctatccaacaatatactttagacttatgccagtgc
ctgccacctcctgtagagaacgtgggtctggagaagtcagattcaagtgtctcacgggag
ttgaatcctgctggaggcacgtcagatgcatctggacagaagcctaccgaaatacctcca
gctgacttgatgcccaaacaatctgttcaagtaggtagatcggaaagtgcaaatgccatt
aggttttcagggagctctgcttcaattgaaaccacagcacaagaagttgctccgaccaat
ggtgaacctaaaacttctggcctggtatctgcaaccagtgatactgatattaggtatgct
ccttctccaccacttcctcttagtcctaggttgtcccggaaacgttctggttgtcatgct
ccaggaaatacctttgagtcagcagtacctcaggttgatctcggtggtaaaccaccagcc
actgattattctgttgacagtcaaatggaggctaatgtgtcctctgctgatgatggctcg
aggaggaatgatgacaaagtcacacacgatgatgcatttgtaattcgaaaccaaccggtt
gttttcaaacatcccactcatcttgtaactccttcggagatattgatgggtgtttcatct
gctgaagctaccagtattactgagggcaagagagatagagatgcaaatgttcaggatgtt
gtgaatactgatgtgggaagcgcagaggtggatgttgaagaagcaggtgaagggagatca
tctcagaatgacgaagttaactatcaggaagaaactgagaaccgtatttcagaaaacata
gaaaaaatattctgctcccaggcctcaaatctcagcactgaaatggcaagagaccgtcat
gctgttatggaggagagttatgttcctgaggaatcacaaacacgtggccaatcttcagaa
gctggggaggaaggaggacgtgatgcaagaagcgcatctggaaaatttcctgaggcttca
ccatctgcgctgccaaagccatcagcttcaaataacaaagggaagaaacagaagggtaaa
agttcacacggttccagtttgttgtctacatcgtcaaatgctaccagtctggcagactct
tataatgaaggtcagaactcaagtcttccaactatagagtcactactgcctcagctccta
gttatgcaagagacaatgaatcagctaatgtcttcacagaaggagatgcagagacaacta
ttgaatgctgtcaatggtcctatcagtaaagaaggtaaaagactagaagtggctttagga
agaatgatcgagaaagtcaccaaggcgaacgctgatgctttatgggctcgttttcaagag
gaggcagctaaaaatgaaaaaagagtgcgtgatcacacacagcaaatagtaaatgcaatg
acgaacttcatgaacaaagaattgaatgatgtgtttgagaaagtggtaaagaaagaattt
gctgcaataggacctgctatagttcgtgcagtaacaccagctattgagaaaacaacattg
tcagccatcactgagtccttccagagaggaatcagtgataaagcaatcaatcaactcgac
aaatctgttaattcaaagcttgaagctaccatagccagacaaattcaagctcaatttcag
acatctggcaggcaagccctccaggaggctctcaggttcagtctggaagcttcgattatc
cctgcctttgagatgtcatgcaagaacatgtttgagcaagtagattctactttccagaaa
gggtttggtgagcacacaggtgctgcccagcaacagtttgaatcagcacattctcggctc
gcgcacactttaagggaaaccattaattctgcttcctcagtagcacaaaccttaaattgt
gaactagccgatggtcagaggaaacttatagctcttgcagctgctggagctaacccgggt
gcaacaaatgccttggttactcaactaagcaacggaccttcgggtgccctccttgaaaag
gttgaggcacctctggacccaactacagaattatctcggatggtatcagagcgcaaatac
gaggaagctttcacatctgctctacaaaggagtgatgtctctattgtctcctggctatgc
tcacaggtggatcttcatgggctactggcaatggtgacgattccgctgagccaaggggtg
cttctgtcacttatgcagcagctggcgtgcgacatcaataatgacacttcccggaagctg
agttggatgacggatgttgctgcggtcataaacccaggagatcagacgatagcggttcac
gcccgtcctatcctcgaacaggtgtaccagatcctccaccaccaccgctccacacctggc
ttgaccggagctgacctatcctccatccgcctagtaatgcacgtcatcaactccatgctc
atgagctgtaaataa
DBGET
integrated database retrieval system
