Tarenaya hassleriana (spider flower): 104810347
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Entry
104810347 CDS
T04125
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104810347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
thj04131
]
104810347
Membrane trafficking [BR:
thj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104810347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
Vps39_1
CNH
TPR_Vps41
TPR_PEP5_VPS11
Motif
Other DBs
NCBI-GeneID:
104810347
NCBI-ProteinID:
XP_010534908
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MAKSRPVLELAARFDLGGNDNDNIRALSLCPLSDSQTLVYVGTFSGSLFLLSFDASSNAV
SRLGSVWLGVSPVESIYILDQESGKVLVLCDGYLFLVDSLLAKPAKRLDGALKGIDVVAR
RFTGRDSVTTDLLPSDTPMDQNKSSSKKFFQMLGTGNRVNGIKSKDVRHQRAPQGNCVFA
VSIGERMLLIELLCDEKDGVSGPFVILKELPGFTGVKSMVWLDDFIIAGTIHGYNLASCV
TGQSGMIFALPDVSGSPLLKLLCKEWKVLLLVDNVGVIVDANGQPVGGSLVFRRRPDSVG
ELCIDVVAVGDGKMEIYQKNTGICVQSVTFGPEGCGQSVLAAEESGNGSIVAVASLSKLI
FYQKVAYEEQIKDLLRKKNYREAISLVEELDLEGEISKEMLSFVHAQVGFLLLFDLHFEE
AVNHFLRSERMQPSEVFPFIMRDPNRWSLLVPRNRYWGLHPPPVPLEDVVDNGLMSIQRA
IFLRKAGVEIPYGEEFLSNPSSRADLLESAIKNVTRYLEISREKKLALPVMEGIDTLLIL
LYRALNRIEDMEKLASTDNYCVVEELETLLNESGHLRTLAFLYANKGMSAEALSIWRLFA
RNYSSGLWQDSHSVCYILDGEPISFSGREAAAAEASRILEESCNQDLVSQHLSWIADINS
SFGIQVLTSDKRTEDLSPEQVIQAIDPKKVEILQRYLQWLIEDRDCNDPQLHTLYALSLA
KSALECMEVQNNVQEGDAGGVEVENCNANITSMFQSYVRERLQTFLQSSDLYNPEEILDL
VEGSELWLEKAILYRKLGQETLVLQILALKLEDCEAAEQYCVEIGRPDAFMQLLDMYLDP
QVGKEPMFKAAVRLLHNHGESLDPLQVLEKLSPDIPLKLASDTILRMLRARVHHHRQGQI
ARNISRALDVDSRLARLEERSRHVQINDASLCDSCHARLGTKLFAMYPDDTIICYKCYRR
LGESTSVTGRDFKQDILIKPGWLVNR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatctcggccggttctggagctcgccgcccgttttgatctcggcggcaacgac
aacgacaatatccgagccctctcactttgccccctctccgattcccaaaccctagtttac
gtcggcaccttttccggatcccttttccttctctctttcgatgcttcatccaatgccgtt
tcgcgtcttggcagtgtatggttgggagtttcaccggtggagtctatctacattctcgac
caggaaagcgggaaagttctagttctctgcgatggttacttattcttggtcgattcgctt
ttagcgaagcccgctaagagactggatggtgcattgaagggcatcgatgtggttgctaga
agatttactggacgcgattcggttactacggatttgttgccctcggacactccgatggat
cagaataagagctcaagcaagaagttttttcaaatgcttggtaccggtaatcgggtgaat
ggcatcaaaagcaaggatgtccgacatcagcgagccccgcaaggtaattgtgtttttgct
gtttctatcggtgagagaatgttactgattgaactcctatgcgacgaaaaagacggcgta
agcggtccctttgttatcctgaaagagcttcctggcttcactggggttaaaagtatggtt
tggcttgatgatttcattattgcggggaccattcacgggtataaccttgcctcgtgcgtg
actggtcaaagtggaatgatatttgctttgcctgatgtatctggttccccgctgctcaaa
ttgctttgtaaagagtggaaggtgttgttgttggtcgacaatgtcggtgttattgtggac
gcaaatggtcagcctgttggcggcagccttgtcttccggaggagacctgattctgttgga
gaattgtgtatcgatgttgtggctgttggggacggaaaaatggagatatatcagaaaaat
acgggtatttgtgttcagtcggttacttttggtcctgaaggatgtgggcagtctgttttg
gctgcagaagagtctggaaatggcagcatagttgccgtggcttccttgtcaaagcttatt
ttctatcagaaagtggcttatgaagaacagatcaaagacctgctgaggaaaaagaactac
agagaagccatctctcttgtcgaggagcttgacttggagggcgaaatttcaaaagaaatg
ctttcttttgttcatgcgcaagtaggatttctactgctttttgatttgcactttgaggaa
gcagtgaatcattttttacggtcagaaagaatgcagccttctgaagttttcccatttatc
atgcgagatcccaatcgatggtctctgctggttccaagaaacagatactggggattgcat
cctccccctgtgcctcttgaagatgttgtagataatgggttgatgtctatccagagagct
attttccttagaaaagcaggtgtggaaattccatacggtgaagagtttttgtcaaatcct
tcaagtagagctgatttattggaatcagcaataaaaaatgttaccaggtaccttgagata
tctcgtgaaaaaaaattagctttgccagtaatggagggaatcgacactcttctgatactt
ctctatagagccctgaaccgaattgaagatatggagaaacttgcatctacagataattac
tgtgttgtggaggagttagagactcttctaaatgaatctggacatctacggactctcgcc
ttcttatatgccaataaggggatgagtgccgaagctctttctatttggcgtctctttgct
aggaattactcatctggtctatggcaagactctcattcagtatgctatatacttgacggc
gagccaattagtttctctggtagagaggctgctgctgctgaagcttccaggattcttgag
gaatcctgcaatcaggatctggtgtcgcagcatcttagttggattgcggatataaattca
tcatttggtatccaagttttgacatctgataaaaggacagaagatctttcaccagagcaa
gtgattcaagcaattgatcccaaaaaagttgaaatacttcagaggtatctgcagtggttg
attgaagatcgagactgtaatgacccacagttgcatacattatatgcactctcgcttgcc
aaatcagctcttgaatgcatggaagtacaaaacaatgtccaagaaggtgatgctggaggt
gtagaggtggaaaattgtaatgccaatattacgtccatgtttcaaagctatgtacgagag
agattgcagacctttttgcaatcttcggatttatataatcctgaagagatcctggatttg
gttgaaggatcagaactgtggttggaaaaggctatcctataccgaaagctggggcaagaa
acattggtcctccaaattttggctctgaaacttgaggattgtgaggctgcagagcaatac
tgtgtggagatcggcagaccagatgcttttatgcagttgcttgatatgtatctggatcct
caagttggtaaagaaccaatgttcaaggctgctgttcgccttctccataatcatggggaa
tcacttgatcctttgcaagttttagaaaaattgtctcctgatatacccctgaaacttgca
tctgatacaattttgagaatgctgagggctcgggttcatcatcatcgtcagggccaaatc
gctcgcaatatttcccgtgcattggatgttgactcgaggttggcaagattagaagaaaga
tcacgacacgtacagataaatgatgcgagcctttgcgattcctgccatgcgcgattgggg
actaagctgtttgctatgtaccctgatgatactattatctgttacaagtgttaccgacgc
ttgggtgaatcaacgtcggtgacaggtcgggacttcaagcaagatatactgataaaacct
gggtggttagttaatcgatag
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