Tarenaya hassleriana (spider flower): 104810539
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Entry
104810539 CDS
T04125
Name
(RefSeq) polyadenylate-binding protein 6-like
KO
K13126
polyadenylate-binding protein
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03015
mRNA surveillance pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104810539
09123 Folding, sorting and degradation
03018 RNA degradation
104810539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104810539
03041 Spliceosome [BR:
thj03041
]
104810539
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104810539
mRNA cycle factors
Stress granule specific factors
104810539
Spliceosome [BR:
thj03041
]
Complex C
Other components
Complex C specific factors
104810539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
104810539
NCBI-ProteinID:
XP_010535185
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MAVANQETAPFRSRQHSVKKASVYVGDLRPDVTEEDLIVKFSSRVPIVSAHLCRCSATGK
SLCYGYVNFNSCFIASNALACLNHTDMMGKPMRLMWFEKDQTLRRSGIGNLFVKNLASSI
TSSCLERIFSPFGSILSCKVAEENRQSRGFGFVQFDSEQSATSARCALHRSVIDGKKLYV
SKFVKKTERAVALGKHDFTNLYVKNLSEGVTEDFLLKTFSPYGRVSSAVVMRDDTGKSRG
FGFVSFSEAENARKAAEALNGAVLGSKKLFVGRAQTKAERLEILKHELEEKFISGFKNSK
WLNLYVKNLSESIDETRLREIFGWYGRVISTKVMRHENGVSKGFGFVCLSNREESKKAKR
ELNGTFVDGKSLVVRVVERKEDRLKRLQRYFTEPSGQVPVGYISGWHFPHVPVRFPGQCT
YIQPFHIGQTSFYMGGSQSFTSYLPVGQQKQNGNPQDKPSASSGTKTGQKHGLSGEENRS
GNAETSLEEATSVLKAALMKSPCSRGSDS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcgaatcaagaaacggcgccgtttaggagccgtcaacactccgtgaagaaa
gcgtcggtatacgtcggcgatcttcgtcccgacgtgacggaggaagatctcatcgtcaaa
ttctcctccagggttcccatcgtctccgcccacctctgccgttgctccgccaccggaaaa
tccctctgttacggctacgtcaacttcaattcctgcttcattgcatcaaatgctctggct
tgcttaaaccacactgatatgatgggaaagccaatgaggttgatgtggtttgagaaggat
cagacgctgcgtcgaagtggaatcgggaatcttttcgttaaaaatctcgccagctcgatc
accagcagttgcttagaacgtatttttagcccctttgggagtatactctcttgcaaagtg
gctgaggaaaacaggcagagtcgaggtttcggcttcgtccagttcgattcagaacaatct
gctacttctgctcgttgcgccctccacagatctgtcatcgatgggaagaaactgtatgta
tctaagttcgtgaagaagacggaaagagctgttgcgttgggaaaacatgatttcacaaac
ctttatgtgaagaatctgtcagaaggtgtgacagaggattttctgctaaagacgttttcc
ccatatgggagagtttccagtgccgtggtcatgagggacgacacgggaaaatcgagaggg
ttcgggtttgtgagtttctccgaggcggaaaatgctaggaaagcggcagaggcattgaat
ggagcagttctcggatccaagaagttgtttgtcggaagggctcagaccaaagccgaaagg
ttggagatcctgaaacatgaactcgaggagaagtttatttccgggttcaagaactcaaag
tggttgaatctgtacgtgaaaaatctgagcgaatcgatagacgaaacgaggctacgagaa
atttttggatggtatggacgagtaatctctactaaagtaatgcgtcacgagaatggcgta
agtaagggattcggttttgtatgtctctctaaccgtgaagaatccaagaaggctaagaga
gagctcaacggaactttcgttgacgggaaatcattagttgtccgagtagtagagcggaaa
gaggatcggctgaagaggttgcagcgttacttcactgaaccatcgggccaagtcccggtc
ggttacatttccgggtggcattttccacatgttcctgtccgttttcccgggcaatgcacg
tatattcagccgttccatatcgggcaaacctctttctacatggggggttctcagtcattc
acctcataccttcctgtcggacagcagaagcagaatggaaatccgcaggacaagccttct
gctagctctggaacgaaaaccggacagaaacatgggcttagtggtgaagaaaacagaagt
ggaaatgcagaaacatcgctagaagaagcaacatcggtcttgaaagcggctttgatgaag
tctccttgttctcgtggcagtgacagctga
DBGET
integrated database retrieval system
