Tarenaya hassleriana (spider flower): 104811062
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Entry
104811062 CDS
T04125
Name
(RefSeq) branchpoint-bridging protein isoform X1
KO
K13095
splicing factor 1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104811062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104811062
Spliceosome [BR:
thj03041
]
Complex A
Other components
Complex A specific factors
104811062
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
104811062
NCBI-ProteinID:
XP_010535910
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MSSTASTSGVKFSMFGAKSGFVIPKNKLSGSLVPTFQGGKTQGGGNAGNEHNTKQEQRKT
KWGPDLTQDTSVKKGRALAYQKRVYQITQQLESGTLEVETSRASALASQNTAGRSLDSQN
NDEMVEHLELERREAIGEILKLNPRYKAPPDYKPLMREARVPIPVKEHPDFNFLNLIFGS
QGETQKRLEKETGAKIQIFGAKTGGEKVEISSTGGNEIQTAWEELYFKISADTYEKVDAA
ITVIELLITSVSGNLEAGGGASASGPKDSSSIPDNTNGTAIDAGSANPVGGCLEIPQFQQ
YGTLATNQTPAYPPLDSSAPILGNPIPGREQAANSLNQAPFSGQQPSPAGQNQAPIRSPM
QVPRAPELISVGFSGPPRTIPVPSPQASLAQPGFMGPLMFSGNQAQPMGPQSMIMRQSAP
SSALQSVPSIGFRPRPLPDIISSNSGQLGRPLAPNFRPHQSGIEQTSFSFSSGISFNHQV
EYPSGGSLRPMAVSLPGGRPSGPIPVNIPSFPSINQSTNAPPRPLQGDFTFQPQQPNIVR
TPQGAQFPRPTFQPAAVNLEPQPFMQGFARPQHFGRPVDQPPSHLPRLFHGNPRSPNLQS
FGPQVLQMRPGNFLPGAQFPDLSAPLPPRPVFRGDNPIPGGWPQNHQRFNTGRHQVYDPF
SPTDG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctactgcatctactagcggtgtgaagttctcgatgtttggtgcaaagtctgga
ttcgttattcctaaaaacaagttatctggttcactcgttccaacattccaaggcgggaaa
acccagggaggtggaaatgcagggaatgagcataacacaaagcaggaacaaagaaaaact
aaatggggacctgatcttacacaagatacatcagttaagaagggaagggctttggcttac
cagaaacgtgtgtatcaaatcacacagcaattggaatctggaactcttgaagtggagact
agtcgagcttcagctttagcctcacaaaatactgctggtaggtcattggattcacagaac
aatgatgagatggtggaacacttggagttagaaaggcgtgaagccattggtgagatactc
aagttgaatccaaggtacaaggctccaccagattataagcctttgatgagagaagctaga
gttccaattccggttaaagaacatcctgatttcaactttctaaatctcatatttggttcc
cagggtgagacccagaagcggcttgaaaaagaaaccggagccaaaattcagatttttggt
gctaagacaggtggagagaaggttgaaatctcttctactggtgggaatgagatccagact
gcatgggaagaattatactttaaaatatctgctgacacttatgaaaaggttgatgcagct
attactgtaattgagctgctaatcacttcggtgtcgggaaatctagaagctggtggtggt
gcttcggcttctggaccaaaggatagttcaagcattccggacaacaccaacggtacagcc
atagatgcgggttctgcaaatccggtaggtggttgtctagaaattccccaatttcaacag
tatggtacgttggctacaaaccagactccagcttatccaccacttgattcctctgctcca
attctcggaaatccaatcccgggacgagaacaggcagccaattcattgaaccaggctccc
ttttcgggtcagcaaccaagtccagctggtcagaaccaggctccaattcgatcacccatg
caagtccctcgtgcaccagagctgatctctgttggcttttccggtccaccaaggactatc
ccagtgcccagtccacaggcttccttagctcaacctggttttatgggtccgcttatgttt
tctggcaatcaagctcagccaatgggaccacagtctatgattatgaggcagtcagcacca
tcatcagcccttcaatctgtacctagcatcgggtttagaccaagacctttaccggacatc
atttcaagcaactccggccaattgggacggcctctggctcctaacttcaggcctcatcaa
tcgggtatcgagcaaacatccttttctttttcctctggtatctccttcaatcatcaggtt
gaatatccctctggtggttctctgcgcccaatggcggtatctttaccgggtggcaggcct
tcgggtcccatccctgttaatatcccgagttttccttccataaaccagtccacaaatgca
cctccaaggccactgcaaggagatttcactttccaacctcagcagccaaacattgtccgc
accccgcaaggcgctcaattccctcgcccgacctttcaacccgcggcggtcaatttagag
cctcaacctttcatgcagggttttgcaagaccgcaacactttggcaggccagttgatcaa
ccgccgagtcacttgcctcgtttgtttcacggtaacccaagatctccgaatttgcaaagc
tttggacctcaggttttgcagatgagaccgggaaactttcttccgggagcccaatttccc
gacctttctgcacctcttccaccgagaccagttttcaggggtgataacccgataccaggt
gggtggccacaaaaccaccagcggttcaacacaggcaggcatcaggtttacgacccgttt
tcacctacggatggctaa
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