Tarenaya hassleriana (spider flower): 104811228
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Entry
104811228 CDS
T04125
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thj03009
]
104811228
Enzymes [BR:
thj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
104811228
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
Other ribosome biogenesis factors
104811228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Ubie_methyltran
PCMT
FtsJ
RrnaAD
Methyltransf_31
RsmF-B_ferredox
RASSF8-10_RA
ASPP2-like_RA
Methyltransf_4
Motif
Other DBs
NCBI-GeneID:
104811228
NCBI-ProteinID:
XP_010536176
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MARGRANAPQRVAGKPPAKQPFSGAERSAYFARREAARILRCVLHGDAERRAVASIKSLV
YSPSVRNKRATFALVCETLKHLNVIKDVLEIANVLNSKWKRQEALIYIICYDILFGQDMP
SVGDAEKFLMGRKDALLSALAKLLVRKKVKSIDELMVPSQHFDVSKPRYVRVNTLKMDVG
SAMHELEKQYTVQKDEIVPDLLVMPPGSDLHDHPLVKNGNIFLQGKASSMVAAALHPEPG
WEVLDACSAPGNKTVHLAALMKGKGRLVACELNKERVKRLEQTIKLSGASNIEVFHGDFL
GLNPEDPSFAKVRAILLDPSCSGSGTTADRLDHLLPSHTADNSANYDTMRLHKLAIFQKK
ALAHALSFPQVERVVYSTCSIHQIENEDVVASVLPLASSFGFKLTTPFPQWNRRGLPVFP
GCKPNICSGWIPSKTKKGSSSPCSLGRPRVIIIYSRKLSNRGIKQDPGEETGSAARLFGR
RCSELGHIPDRSASIVRTIEGGESRIR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtggcagagcaaacgcgccgcagcgagttgccggaaaaccgccggcgaaacaa
ccgttttccggcgcagagagatcagcttacttcgccagaagagaggcggcgaggattctc
cgatgcgttctccacggcgatgccgagcgacgagccgtcgcctccatcaagtctctcgtc
tacagcccttccgttcgcaacaagcgcgcaacctttgctcttgtatgcgaaacgctcaag
catcttaatgtcatcaaggatgtgctggaaattgccaatgtactgaatagcaaatggaag
aggcaagaggcgttgatctacattatttgttatgacatcctctttggtcaggatatgcca
tcagttggtgatgctgagaagtttctcatgggacggaaagatgctcttttgtcggctcta
gccaagcttctagtgagaaagaaagtcaaaagcattgacgagttgatggttccttctcaa
cattttgacgtttcaaaaccacgttatgtccgtgtaaatacgcttaagatggatgtgggt
tcggcaatgcatgaactggagaaacaatatactgtgcaaaaagatgagatagtccctgac
ttgttggtgatgcctcctggcagtgatttgcatgaccatcctctggttaagaatgggaat
atatttttacaggggaaggcaagttctatggtggctgcagcacttcacccagaaccagga
tgggaggttcttgatgcatgttcagctccaggaaataaaactgtccatctcgctgccctc
atgaaaggaaaaggaagactcgtagcatgtgaactaaacaaggaacgggtaaagcgcctg
gagcagactattaagctatctggtgcttctaatattgaagtctttcatggtgattttttg
ggcctaaatccagaggacccttcttttgcaaaggttcgggctatactattggatccttcg
tgctcgggctccggcaccactgctgatcggttggaccatctccttccttctcatactgcc
gataattccgctaactatgacacaatgagattgcacaagcttgccattttccagaagaag
gctcttgcccatgcactctcctttccacaggttgagagagttgtatacagcacgtgctcc
attcaccagatagagaacgaagacgtcgtagcatctgttttaccgctcgcctcatccttt
ggcttcaaactcacaactccttttcctcagtggaatcgccgtggccttccggttttccct
ggatgtaaaccgaacatttgctcaggatggatcccgtcgaagacaaagaagggttcttca
tcgccttgttcgttaggacgaccacgggtgataataatctacagtcggaaactctcaaac
aggggaataaagcaagatccgggagaagaaacgggatccgccgctcgtttgtttggccga
agatgttcagagcttggtcatattccagacagatctgcctcgatagtacggacaatcgag
ggaggagaaagccgtattagatga
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