Tarenaya hassleriana (spider flower): 104811536
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Entry
104811536 CDS
T04125
Name
(RefSeq) uncharacterized protein At3g06530
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104811536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thj03009
]
104811536
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104811536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
Motif
Other DBs
NCBI-GeneID:
104811536
NCBI-ProteinID:
XP_010536553
LinkDB
All DBs
Position
Unknown
AA seq
2211 aa
AA seq
DB search
MASSIASQLQAIKSLVQADTEPLKRPFTRPSILFSPKAAADVDIETIYNLGLGGLESLVR
IEERFGNYKNDLFSHKSRDLDRELVGREENDRIDASLSSFLRLLSGYLQHRASLETLEYL
IRRYKIHVYNSEDLVLCALPYHDTHAFVRIVQLIKTGNDKWKFLDAVKTSGAPLPRSVIV
QQCVRDMQVLEVLCEYASRTKKYQPSKPVVNFCTAIIVGVLGSITPVDSDVVKRILPFVD
SGFQPGVRDGSDHQAGALMIIGLLANRSTLDKDLFPRFIRSIAEIAHEHAKDSSDPQWLR
LSFMALINFVQLQPVKEIPKKALNLLKEIRDISGVLLGLSKEFSINGFLVVLLHSFLRQS
SSDDQCCQALTSIIDTVPINNLVDRLISEVFSLCMMSYQKGNDFASTASGSWAKKILLVI
GKNYPAELHKAVSKFMEDSEVKSKKEGAKLEMLSRMLDGNSVMSQPFLDSKLWFRLHHPK
AAIRRAALSSLNGVIKVDNANSESLVTVQDAILRQLWDDDLTVVQAALSLDRLCDILSAS
DLMEAVLHVVKRCTDILTSGLSRNVDLAVDVVASSLKVAISGLYNLADFDQKVTATMFPF
LLVQPKTWKLNVHVLELVKEVNWPLCKNLAADDAMKKVPDLLSGSLPPISKEVISNLGQT
LALHSDERRLELIESFCNFKLSELVKTCNDIKLTEQERCKLQKGLLIRENLSSLNMDIIS
KLAKMFMMRPGDHMKWITDSCRDCPMSKTLFFMLLIQSVHMMNSDSSQILDLFEVTFPVL
KSEWEDLEVAVDVSLKELSKSNCQELLYQLIDADIASLNSKLLNCLYWKFLESFIKLEPV
NAFSVSSRRLVRGLEDLFYFFATARARHVFKEHLQYRVNGAKVCPVYFLTGLVSREDVPA
EVQIESLKCFLHLCSNGSSEWLTYLFPSFPVLLIPLSSDNQDIKVAAMNCIEALYHLWCR
VDFSSKKNGNAAVCSGFYDELLGLIVQQRRLILSDNNFLPSILTSLLSSTSDNLLVPVDL
QKRFDQSTKEKIISFILLRTQELPAYGKLRIMMLLKGLGVILLHDKNLVSLLSQLLDRRT
RYYFKLDETCQQLSDYEVKILCLLLECAIMPSPASEGHSLDDHILNALQIDCKSPEDPAV
MFPCLTVLDKLNSQFYVQLKAKIQDRFFHKMVSLFRSANGNIQNAVKDAVLRLEISCSTV
VRTLDPVIHLETLAFCSLREKKKQKKNSASCIEDDVNNAVLQSGEKALCFVASLLDVLLL
KKDLRHRESLIRPLLKLLGRSMTHEWVKIAPSSEEASVQSSQDVLQTIHSSISSIQHTVL
LILKNICDSLMDFTPLKADLATEINVNMLVELAHSSNDGVTRNYVFSLFTSIVKVVPDKI
LDHIISILTLVGESTVTQIDSHSKSVFEEFISSVVPFWLSKTNSEEQLLQIFVKVLPDVT
EHRRLSIVTYLLGIIGEQKGLPSLLVLLFRSLVSRQDSSWFDDARTSESFTPLAMREWEY
AFAVKICEKYSSITWLSSLVVLLENINKHNPSGEFVSELLLVLEFVFQKLQDPEFAFLVA
HEPRNDVSDGIQQKLLELMKGCIFLLQAIDAAPKGMDVSPGVRKDLRIRAHAVLMTTTAA
MDPSVYFKGITSLLQQSDSNVTKKVLGLLSETAKDTNSSKVKHNMRRVVNPKRKNPWLNL
DEVATESFGKMCEEIVHQIDHTDDELGAPAKQTAVSTLEVLANRFPSGHPIFSKCLRSVA
KGISSKNVGVSSNCLHTTASFVNVLGPKALPELPRIMRNLIKISHEVSSVSRNNGSTRIE
EESLLLSILVTLEAVVDKLGGFLNPYLGDIVKLVVLRPEFVSELNQKFKFKADAIRELIT
EKIPVRLTLQPLLKIYDEAVYSGDRSLVIAFEILANLVVKMDKSSIGGYHGKIFDQCLLA
LDIRRQNPASVQNIDVVERSIINAIIALTKKLTESMFKPLFIRSIEWAESDVENMSGGES
KSIDRAISFYGFVNQLSESHRSLFVPYFKYLLDGIVSHLTSMEASISSRKKKKAKIQEAG
DAIPPKSWHLRALVLSSLKNCFLYDTGSVKFLDSNNFQVLLKPIVSQIVVEPPASLDDYP
YAPSVLEVDELLVSCIGQMAVAAGSDLLWKPLNHEVLMQTRSEKLRARILGLRTVKQFLD
NLKEEYMVFLAETIPFLGELLEDVELSVKSLAQDILKQMEEMSGESLRQYL
NT seq
6636 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcaatcgcgtcgcagttacaggccatcaaatcactagtacaggctgatacg
gagcctctcaagagacccttcactcgcccttccattcttttcagccctaaagcagctgct
gatgtcgatatcgagaccatttacaacctcggcctcggaggtctagaatcgcttgtaagg
atcgaggaaaggtttgggaattacaagaacgatttgtttagtcataagagcagagatttg
gatagagaactggtgggtagagaagaaaatgaccgaattgatgcatcacttagttcgttc
ctacggttactatcaggttatcttcaacatcgcgcttccttggaaacgctcgagtaccta
atacggagatacaagattcatgtatacaattcagaggatttggtattatgtgccctgcca
tatcacgacacacatgcatttgtgcgtattgttcagctgatcaagactgggaatgacaag
tggaaatttctagatgctgtgaaaacttctggtgctccacttcctagatcggttatagtt
cagcagtgtgtccgtgatatgcaggttttggaagtcttgtgtgaatatgcatctcggact
aagaaatatcaaccttcgaaacccgtagtcaacttctgcacggccattattgtcggggtt
ttaggttctatcacacctgttgacagtgatgtcgtgaagcgaattctgccatttgtggac
tctggttttcaacctggtgtgagagatggttcagatcaccaggctggtgctttgatgatt
attggcctcctggccaacagatccacgctggacaaagatcttttcccacgctttatacgg
tccattgctgagatagcacatgaacatgctaaagattcctctgatcctcaatggcttcgt
ttgtcattcatggctttaattaattttgttcagctgcaacctgttaaagagatcccaaag
aaggctttgaaccttttaaaggaaataagggatatatctggtgttcttttgggcttgtcc
aaagagttcagcatcaatggattcctggtggtgctattgcattcttttcttcgtcaaagt
tcctctgacgatcaatgttgccaggctttaacttcgatcatagatacggttcctattaac
aatttggttgatcgtttgatctcagaggttttctctttgtgcatgatgtcataccaaaag
ggtaatgattttgcatcgactgcatccggaagctgggccaagaaaattttgcttgtaatt
ggcaagaattatcccgcggaacttcacaaggcagtttccaagtttatggaggatagtgaa
gttaaatcaaagaaagagggcgcaaagctagagatgttgtctcgtatgttggatgggaac
tcagttatgtcccagccattcttggattcaaagttatggttcaggctccaccatcccaag
gctgccattcgccgtgccgcactgtctagtcttaatggtgttatcaaggttgataatgct
aattcagagagtcttgtgacagttcaggatgccatattgcggcagctttgggatgatgat
ctgactgttgttcaggctgccctgtctttggatcggttgtgtgatattcttagcgcttct
gacttgatggaagcagtgcttcatgtggtaaaacgatgcaccgacattctcacgtcagga
ttatcacgcaatgtagatcttgctgttgatgttgttgcttcgtctcttaaagttgccatc
tcaggcctctataacctggctgactttgatcagaaagttactgccacgatgttccctttt
cttctagttcagccgaagacatggaagttgaatgtacatgtcctggaattggtgaaggaa
gttaactggccactttgcaagaatcttgctgcagatgatgcaatgaaaaaggtaccagat
cttctctctggaagtttgcccccgattagtaaggaggttatcagcaatttggggcaaaca
cttgccttgcattctgatgagcggaggcttgagcttattgagagcttttgcaactttaag
ttatctgaactcgtaaaaacttgcaatgatatcaagctgacggaacaggaacgctgcaag
ttacagaagggattgttgatccgtgaaaatctgtcatcattgaacatggatataattagc
aagctggcgaaaatgtttatgatgcgcccgggtgaccatatgaagtggattactgacagt
tgcagagattgtcccatgtcaaagactcttttctttatgctgttgatacagtcagtacac
atgatgaattctgattctagtcaaatattggatctatttgaagttacctttccggttctg
aagtctgaatgggaagatcttgaggttgcggttgatgtttccttgaaagagctgtcgaaa
agcaactgccaggaactcttatatcaacttattgatgctgatatagcttcactgaattcg
aagcttttgaactgcttgtattggaagtttcttgagtcattcattaaactggaaccagta
aatgccttttcggtaagtagcagaaggttggttcgtggacttgaagatttgttttacttc
tttgctactgcccgagcaaggcatgtttttaaggaacaccttcaatatcgcgtgaatgga
gccaaagtctgccctgtttattttctaaccgggcttgtttcacgtgaagatgtccctgct
gaggttcaaattgaaagtctcaaatgttttttgcatctttgctccaatggatctagtgaa
tggttgacttaccttttccccagctttcctgtacttttgattcccttatccagtgataat
caggacatcaaagttgctgccatgaattgcattgaagctctctaccacctatggtgtcgt
gttgacttctctagcaagaaaaatggaaatgctgcagtctgcagtggcttctatgatgaa
ctcttgggattgattgttcaacaaaggaggcttattttatcagacaataactttcttcca
tctatcttgacatcactacttagctcaacatcggataatcttctggtgcctgtggacctg
caaaagaggtttgatcaatcgacaaaagaaaaaatcatatcattcatcttgttgcgcact
caagagcttcctgcttatgggaagctaaggatcatgatgttgttaaaaggtctgggagtc
atactgctgcatgataaaaatcttgtctcgttgttgtctcaacttctagacagacgcact
cgatattatttcaaattggatgaaacatgccagcaactgtcagactatgaggtcaagata
ttgtgccttcttctggagtgcgccatcatgccttccccagcctctgaaggccattctctt
gatgatcatatattgaatgctttacaaattgattgcaagtcaccagaagatcctgctgtc
atgtttccttgtcttactgttttggataaactaaatagtcaattttatgttcaactgaag
gctaagatccaggatcgtttcttccataagatggtgtctctgtttcggagtgcaaatggc
aatattcaaaatgcagttaaagatgctgttttgcgcttggagatttcttgttcgacagta
gtccgtacccttgatcctgtaattcatctggaaactcttgcattttgttctttgagagaa
aagaagaaacagaagaagaattcagcttcatgtatagaagatgatgtgaacaatgctgta
cttcaatcgggcgagaaggctctctgtttcgttgcctcattacttgacgtgcttctcctt
aaaaaggatctgagacacagggagtcccttataaggcccttgcttaaacttctaggaaga
tcgatgacgcatgagtgggtgaagattgctccttcctcagaggaagcttctgtccaatct
tcacaagatgttcttcaaacaattcatagctcaatttcttcaatccaacacacagtgctc
ttaattcttaaaaatatttgtgattcactgatggattttactcctttaaaggctgaccta
gcaactgaaatcaatgtcaacatgctggttgagttggctcattcatcaaatgatggggtc
acccggaactatgtcttctctctgttcacctcaattgtcaaagtggttcctgacaagatt
ttggatcatattattagcatattgacacttgttggtgaatcaaccgtgactcagattgat
agccactccaagtctgtcttcgaggaattcatatcatcagtggttccattttggctatcg
aaaactaacagtgaggagcagttgcttcagatttttgtgaaggtattacctgatgttact
gagcacagaaggctatccattgttacgtatctgttgggaattatcggtgagcaaaaaggc
ttgccttctttgcttgttttattattccgatccttagtctcaaggcaggactcatcttgg
tttgatgatgctcggacttctgaaagttttacgccccttgccatgagggaatgggagtat
gcttttgcagtgaaaatatgtgaaaaatattcctctatcacatggctctcgtccctggtt
gtgcttcttgaaaatattaacaaacacaatccgagtggagagtttgtcagtgagctgtta
ctcgttttagaatttgtatttcagaaattgcaagacccagagtttgcatttctagttgca
catgaaccaagaaatgatgtctccgatggcattcagcaaaaactactggagcttatgaag
ggttgtatatttctcttgcaagccatcgatgcagctccaaagggaatggatgtatctcct
ggagttaggaaagatctcaggattcgtgcacatgcagtcttgatgactaccacagcagcc
atggatccttctgtatatttcaaaggaattactagcttgcttcagcaatcggacagtaat
gtaacaaagaaggtacttggccttttaagtgagactgctaaggacaccaattcgtctaaa
gtgaaacacaatatgagaagagtcgtcaatccaaagagaaaaaacccttggttgaatctg
gatgaggttgccactgaatcctttggaaagatgtgcgaggaaattgttcatcaaatcgat
cataccgatgatgagttgggtgctccagctaaacaaactgctgtttctacgctggaagtt
ttggctaacaggtttccatccggtcatccaattttcagcaaatgccttagatctgttgca
aaaggcattagttcaaagaatgtgggagtgtcttcaaactgccttcatacaactgcatca
tttgtcaatgttcttggaccaaaggcactgcctgaacttccacgcataatgaggaatttg
ataaaaatatcgcatgaagtgtcatcggtgtctaggaataatggtagcacaagaattgaa
gaagagtctcttctgctgtctattctggtcactctggaagcagtggttgataaacttgga
ggtttcctcaatccttatcttggagatatagttaaacttgtggttttgcgtcctgaattt
gtttctgaacttaaccagaagttcaagttcaaagccgatgccatccgtgagctcataacc
gaaaaaataccagtccgtctcactctgcaaccacttctgaagatatatgatgaggccgtt
tattctggggatcgaagcttggtgattgcttttgaaattctggcaaacttggttgtaaaa
atggataagtcatctattggtgggtaccatgggaagattttcgaccaatgcttgctcgcc
cttgatatccggcgtcaaaatccagcatcagttcaaaacatcgacgttgttgagagaagc
ataatcaatgcaatcattgctctcacgaagaagctaactgagtccatgttcaaacccctc
ttcatcaggagtatagaatgggcagagtcagatgttgaaaacatgtcaggcggtgaaagc
aaaagcatagacagagctatatctttctatggctttgttaatcaactttctgagagccac
cggtccctctttgtcccatacttcaaatacttactcgatggtattgtatcacatctcact
agcatggaagcttcaatttcatctaggaagaaaaagaaggccaagattcaggaagccggt
gatgctataccacctaaaagctggcatcttagagcgttagtgttgtcttccttgaagaac
tgctttctgtatgatacaggaagtgtgaagtttctagactcaaataactttcaggtgcta
ctaaaacctattgtatcacaaattgttgtagagccgccagcttctttggacgactatcca
tatgcaccatcagtactggaggttgatgaactactggtttcttgcattggtcaaatggcc
gtggcagctgggtctgaccttctctggaaaccgctgaaccacgaggtgttgatgcaaacc
cggagtgagaagctacgagcccggatattaggcctgagaaccgtcaaacagttcttagac
aatctgaaggaagaatatatggtgttcctcgcggaaactataccgttcctcggcgaactg
ctcgaagacgttgaactctcggttaaatctctggcacaagacattctaaagcagatggaa
gaaatgagtggagaaagcctgaggcagtacctctga
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integrated database retrieval system
