Tarenaya hassleriana (spider flower): 104812869
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Entry
104812869 CDS
T04125
Name
(RefSeq) DNA-directed RNA polymerase II subunit 2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03020
RNA polymerase
thj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104812869
09124 Replication and repair
03420 Nucleotide excision repair
104812869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thj03021
]
104812869
03400 DNA repair and recombination proteins [BR:
thj03400
]
104812869
Enzymes [BR:
thj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104812869
Transcription machinery [BR:
thj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104812869
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104812869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
104812869
NCBI-ProteinID:
XP_010538559
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MEDYNEYEQQYVDEDDDEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
SANIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT
YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPST
MFVRMLSRASSKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDKRIKYAKDILQKEMLPHVGTGDF
CETKKAYYFGYIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
SYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVN
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVENQSLLIKKKDIYALQQRESSEEGGWHDLV
AKGFIEYIDTEEEETTMISMTINDLVQAKLRPEEAYSDTYTHCEVHPSLILGVCASIIPF
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
RANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQSSRYTRRDHSIS
LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP
WTAEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVENISRALH
KCGYQQRGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKKNSFE
CRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDVKSAKDHGKK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggaggattacaacgaatacgaacagcaatacgtagatgaagatgatgacgaggatatc
acccaggaggacgcttgggccgtcatctccgcctacttcgaggagaaaggtctcgtgcgt
caacagctcgattctttcgacgagttcattcagaacacgatgcaggaaattgttgatgaa
tccgctaatatcgagatccgaccagagtcgcagcacaatcccggtcaccagtctgatttc
gctgagacaatctacaagatcagctttggccagatttatttgagtaaaccaatgatgaca
gagtctgatggagagactgcaaccttgtttcccaaggctgcgaggttgaggaatctcacg
tattctgcaccattgtatgtagatgttactaagagagttatcaagaaaggccatgatggt
gaggaagttacggaaacacaggattttaccaaagtttttattggcaaggttcctattatg
cttcggtctagctattgtaccttgtatcagaattcggagaaagatttaacagagctaggg
gagtgcccctacgaccaaggtggatactttataattaatgggagtgaaaaagttcttatt
gctcaggaaaagatgagcacaaatcatgtttatgttttcaagaagaggcaaccgaataaa
tacgcctatgtagctgaagttcgttccatggctgagaaccaaaataggcctccaagcaca
atgtttgttcgtatgctttctcgagccagttccaaaggggggtcgtctgggcagtatatt
cgctgcacccttccatacatcagaactgaaattcctattatcattgtgtttcgagcatta
ggatttgttgcggataaggacatattggaacacatttgctatgatttttccgatactcag
atgatggaattgctccggccttccttggaagaagcctttgttattcaaaatcaacaggtt
gcgcttgactatatagggaaacgtggagcaactgtcggagtaaccagggataagaggata
aagtatgctaaagatatccttcagaaagaaatgcttcctcatgttggaactggggatttt
tgtgagacgaagaaggcatattattttgggtatatcatacaccgtttgctgctttgtgct
attggccggaggccagaagatgacagggatcattatggcaacaaaaggctggatcttgcc
ggtcctttacttggaggcttgtttagaatgcttttcagaaagctgacaagggatgttaga
tcttatgtacagaagtgtgttgacaatggaaaggatgtcaatcttcaatttgctattaag
gctaagactatcacatctggcctcaaatattctcttgctactgggaattgggggcaagcg
aatgctgctggtaccagagctggagtctcgcaggtgttaaatcgattaacatatgcttcc
actttgtcacacttaaggcggttgaattctcctataggacgtgaaggaaaattggcaaaa
ccgcgacaactgcacaactcacagtggggaatgatgtgccctgctgaaacgcctgaagga
caggcttgtggtctggtgaaaaacttggcactcatggtctacataacagttgggtcagct
gcctaccccatattggaatttttggaagaatggggtactgaaaattttgaggaaatctct
ccagcagttattccccaggcaactaaaatttttgttaatggatgttgggttggaattcat
cgagatcctgatatgttagtaaaaacattgagacgtttgagaagacgggttgatgttaac
actgaagtcggtgttgttagagatattcgtctcaaggagctccggatttataccgactat
ggcaggtgcagtcgtccattattcattgttgagaatcagtcgcttctaataaagaagaag
gatatctatgctttgcaacaaagggaaagctctgaagaaggtggctggcatgaccttgta
gcaaagggttttatagaatatatagatacagaggaagaagagacgacgatgatttccatg
actatcaatgatctggtacaagctaaattgcgccctgaagaagcttattctgatacttat
acacactgtgaggttcacccatcgttgatattgggtgtatgtgcttcaattattccgttt
cctgaccataatcagtcacctcgtaacacataccaatctgccatgggtaagcaagcgatg
ggcatatatgtcaccaactaccaattccgcatggatactctggcctatgttctctattac
cctcagaagcctcttgttactacaagggctatggagcatcttcactttaggcagcttcca
gctggcattaatgctattgtagccatttcatgctactctggttataaccaagaagattca
gtcattatgaaccaatcttcaatagatcgtggtttcttccgatctctgttcttccgttca
tacagagatgaggagaaaaagatgggaacccttgtcaaagaagactttgggcggcctgat
agagctaataccatgggaatgcggcatggctcttacgataagttagatgatgatggtctt
gctcctcctggtacaagagtttcgggtgaagatgtaattattggaaagaccactccgata
tctcaagatgaggctcaggggcagtcgtctcgttacacaagacgggatcacagcataagc
ttgcgtcatagtgaaactggcatagtggatcaggtattattgacgacaaatgcagatggt
ttgaggtttgtgaaagttagggtaagatctgttagaattcctcagattggggacaagttt
agtagtagacatggacagaagggaacagttggcatgacctacactcaagaggatatgccc
tggaccgctgaaggcatcactcccgacattatcgtgaatccacatgccattccatctcgt
atgacgatcgggcagcttattgagtgtatcatgggcaaggtggcggcccacatgggcaag
gaaggagatgctactccttttacagatgtcacggtggagaacatcagcagagctctgcat
aaatgtgggtaccaacagcgtggatttgagagaatgtacaatggtcacacaggcagacca
ctcacagctatgatattccttggaccaacatattaccagagattgaagcacatggttgac
gacaagatccactctcgtggacgaggtccagtccagatcctcacgaggcagccagcggag
ggacgatctcgtgatggtggtctccgttttggagaaatggaacgcgactgtatgattgca
catggtgctgcccactttctgaaggagaggttgtttgatcaaagtgatgcatataggata
catgtctgtgaatgctgtgggctcatcgccattgcgaatctaaagaagaattcgttcgaa
tgtagaggttgcaagaacaaaacagatattgttcaggtgcacattccatatgcatgcaag
ctgctgttccaggaacttatgtcgatggcaattgcgccaaggatgcttacaaaagatgtg
aaatccgccaaagaccatggaaagaagtga
DBGET
integrated database retrieval system
