KEGG   Tarenaya hassleriana (spider flower): 104813616
Entry
104813616         CDS       T04125                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03013  Nucleocytoplasmic transport
thj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104813616
   03015 mRNA surveillance pathway
    104813616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thj03019]
    104813616
Messenger RNA biogenesis [BR:thj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104813616
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_ACIN1 RRM_3 RRM_5 Nup35_RRM_2
Other DBs
NCBI-GeneID: 104813616
NCBI-ProteinID: XP_010539585
LinkDB
Position
Unknown
AA seq 421 aa
MAKPSSGRRSPSVSGPGSSSRSLSRSNSRSRSRSRSGSSPSRSLSRSRSRSRSASSSSSP
SRSVRSGSRSPTPRRRSPSGPARRGRSPPPHSKRASPPPRKASPMRESLVLHIDSLSRNV
NEGHLKEIFSNFGEVVHVELAMDRAFNLPKGYAYVEFKARADAEKAQLHMDGAQIDGNVV
KAKFTLPPRKKVSPPPKPVSSAPKRDAPRSDNAGADSEKDEPKRVREASPSRKPLTSPRR
RSPVPKRGDSPPRRRLESPIRRRGESPNRRGDTPPRRRPASPSRGRSPTSPPRRYRSPPP
SRGSPRRIRGSPVRRRSPLPLRRRSPPRRIRSPLRRSPIRRRSRSPIRRPAHSRSRSISP
RRGRGPAGRRGRSPSSSSSPSPRRAPRRISRSRSPRRPLRGGRRRSNSSSSSSSGSSPPR
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgaagccgagtagtggacgtcgctctccgtccgtctctggtccgggttcgtcctct
cgttctctgtcgcggtcgaattccaggtccagatctcgttcccgctctggttccagcccg
tcgaggtctctctcgcgttcccgctcccgttctagatcggcctcttcgtcttcttctcct
tcgcggagcgtaaggtccggaagccgcagtcctacacctcgtcgaagaagcccttcagga
cctgctagacgaggtcgctctccgcctccacattctaaacgagcctctccaccgccaagg
aaagcttcacctatgcgggagtctcttgttcttcatatcgactcgctcagccggaatgtg
aatgaaggccatctgaaagaaatattcagcaactttggtgaagtagtgcatgtggagctt
gcgatggatcgggcttttaatctaccaaaaggatatgcatatgttgaattcaaggcaaga
gctgatgctgagaaggcgcaactgcacatggatggtgcccaaatcgatggaaatgttgtt
aaagccaagttcacgctgcctcctcgtaagaaagtatctcctccccctaaacccgtttca
agtgcaccaaaaagagatgctccgagatctgataatgctggcgctgacagtgagaaagat
gagcctaaacgtgtgagggaagcttctccttcacgaaaacctctgacttctccaagaagg
cggtcacctgtgcctaagagaggtgattctcctcctcgacgaaggttggagtctcctatc
cgtcgtagaggtgaatctcccaaccgtcgtggtgatacaccaccaagacgcaggccagca
tccccatctagaggccgttctccgacttctcctccaaggcggtataggtctcctcctcca
agtaggggctccccccgaaggatacgtggcagtcctgttagaagacgttctcctctgcct
ctaaggcgcaggtcacctcctaggcgaatccgcagtcctcttagaagatctccgatccga
aggcgtagccgatcgcccatccgtagacctgcccattctcgctcaaggtcaatctcacct
cggaggggccgaggtccggctgggagacgtgggaggtcaccttcctcctctagttcacct
agtccccgcagggctcccaggaggatatcaaggagccgcagtcctaggaggccattgaga
ggaggaagaagaagaagcaacagcagcagcagcagcagcagcgggagctcacctcctcgg
ggatga

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