Tarenaya hassleriana (spider flower): 104814190
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Entry
104814190 CDS
T04125
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03420
Nucleotide excision repair
thj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104814190
09124 Replication and repair
03420 Nucleotide excision repair
104814190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104814190
03400 DNA repair and recombination proteins [BR:
thj03400
]
104814190
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104814190
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
104814190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
NBCH_WD40
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_LRRK2
Beta-prop_RIG_1st
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
104814190
NCBI-ProteinID:
XP_010540399
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MWEDIRDRETGRIRSNSFANRFKSHRVSSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL
SGASDASAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAVSSAIWYPIDTGLFV
TGSYDHYVKVWDTNTAQAVVDFKMPGKVYKTAMSSLAMSHTLIAAGTEDVQVRLCDIASG
AFAHTLSGHRDGVMSVEWSTSSEWVLFTGGRDGAIRFWDIRRAGCFRVLDQSQTQLGRRP
PILKRAAVNSKVSASKSSSGGQNLHVRSKAQRKHSDSQIFRGSSSGKSSVDRTGRKEKRL
HPGMLSSLDRATAHYGVVTSLKATNDGMYLLSAGSDSRIRLWDIESGCNTLLNFETGRLQ
TNKATELATSDEPALVFVPCMKTVKAFDIWSGKTTLAFRGHYDVVNCCWFDSLNQELYTG
GTDRQILTWSSPYGSSADEMEMDTVAEDKDNWSD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaggatatcagagatagagaaaccggtcgaattcgttctaattccttcgccaat
cgattcaaatcccatcgggtctcgtccctccagctctcgaatcgcaaagactttgtctct
cctcatcgtggctccgtcaattcgctccaggttgatttgacagaggggagatatttgctc
tctggagcatcagatgcttcagctgctgtgtttgatgttcagcgggccactgattacgag
gcaagtggtcttattgcgaagcacaagtgtatatttactgtcgacaagcaacatgaaaat
ggacataaatatgccgtatcctctgccatatggtatcccattgacacagggctgttcgtt
acaggttcatatgaccattacgtaaaagtctgggatacaaataccgcacaggcggttgtg
gattttaaaatgccgggaaaggtgtataagactgccatgtcttccttggcaatgtctcac
acattaattgcggctggaactgaagatgtacaggttcgcctctgtgatatagcttccggg
gctttcgctcacacgttatctggtcaccgtgatggtgtaatgtctgtggaatggtctact
tctagtgagtgggtattgtttaccggaggacgtgatggtgcaatacgtttttgggacatt
cggcgtgctggatgttttcgtgttctagatcaatcacagacacaacttggtagacgccca
cctattctaaagcgtgcagcagttaacagtaaggtttcagcatcaaaatcttcatctgga
ggtcaaaatcttcatgtaaggtcaaaggcgcaaaggaaacattcagacagccagattttt
aggggatcatctagtggtaaatcttcagtggacagaactggtcgaaaagaaaagagactt
caccctggaatgttatctagtctagatcgggctactgctcattatggcgttgttacgagc
ttaaaagcaactaatgatgggatgtaccttcttagtgcagggtcggattcgagaataaga
ttgtgggatattgaatctggatgcaatacccttctgaactttgagactggacgcttgcag
actaacaaggcaactgagttagccactagtgatgaaccagctctggtttttgttccatgc
atgaaaactgtcaaggcttttgacatttggtcgggtaaaacaacgctggcatttcgtggg
cactacgacgtcgtcaactgttgctggttcgattcccttaatcaggaactgtacacagga
ggaaccgatagacaaatactcacatggtcgtcaccatacggatccagcgcagatgagatg
gaaatggacactgtggcagaagacaaggataactggagcgactga
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