Tarenaya hassleriana (spider flower): 104814912
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Entry
104814912 CDS
T04125
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03420
Nucleotide excision repair
thj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104814912
09124 Replication and repair
03420 Nucleotide excision repair
104814912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104814912
03400 DNA repair and recombination proteins [BR:
thj03400
]
104814912
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104814912
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104814912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_IFT140_1st
AvrPtoB-E3_ubiq
Motif
Other DBs
NCBI-GeneID:
104814912
NCBI-ProteinID:
XP_010541451
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MDSARTKRRRQPDFVIARDTDSEASSSDDDEEEEEAFEESEPYENGRETELGLSAKKTKK
VPITVKLKKVCKVCKQAGHEAGFRGATYIDCPMKPCFLCKMPGHTTMTCPHRVTTEHGVI
PASHRNTKNPIELVFRRQLQSRIPPIKPEFVIPDQIHCGVLRYHSRRVTCVEFHPTKNHI
LLSGDKKGQVGVWDFGRVYEKITYGNIHFIQVNNMKFSPTNNDMVYTAASDGTVGYTDLE
TGISLTLLNLNPDGWQGPSTWKMLYGMDINSEKGVVLVADNFGFLHLVDHRTHCRVGEPI
LIHKQGSKVVGLDCNPVHTELLLSCGNDHFARIWDMRRLQPGGSLHELAHRRVVNSAYFS
RVSGTKILTTSQDNRIRVWDSIFGNLDLPSREIVHSHDFNRHLTPFKAEWDPKDPSESLV
VIGRYISENYNGAALHPIDFIDVSTGQLVAEVMDPNITTISPVTKLHPYDDVLVSGSSRS
LFIWKPKEKTEMVEGKKDQKIVTCGGGGDGKKKGKGKRKPGSDEDDSDDDMFSSKGKSIK
VQKSRIKVTKSNGKAKQRQG
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggactcagccagaaccaaaagaaggaggcaaccagattttgtaatcgccagagataca
gattccgaggcaagctcctctgacgatgacgaagaagaagaagaggcttttgaagaatct
gaaccctacgaaaatggaagggaaactgaattgggactctcggcgaagaagacgaagaaa
gtacccattaccgttaagctcaagaaagtttgcaaagtctgtaagcaggctggtcatgaa
gccggatttagaggggctacatatattgattgtcccatgaaaccttgcttcttatgcaaa
atgcctggccacaccacgatgacatgtccccatagagtcaccaccgagcacggagtaatc
ccggcctcccaccggaataccaagaatccgatcgagcttgtgtttagacgccaacttcaa
tcgagaataccccctatcaagccggaatttgtgatcccagatcagatacattgcggagtt
ttacgataccatagcagacgagttacatgtgtggagttccatccaactaagaaccacatt
cttttgtctggagataagaaagggcaagttggagtctgggattttggtagagtatatgag
aagatcacgtatggaaacatacacttcatacaagttaacaacatgaagtttagccccacg
aataatgatatggtatacactgcggcctctgatggaactgttggttacaccgatctggag
actggaatctcgttaaccttgcttaatctcaatcctgatggatggcagggtccaagcact
tggaaaatgctatacggtatggatattaattcagagaaaggtgtggtgcttgttgctgac
aatttcggttttcttcacctggtggatcatcgaacccactgcagagttggtgagccgatt
ttgatacacaagcaaggaagcaaagttgtcggtcttgactgcaacccagttcacacagag
ctgcttctgagttgtgggaacgatcattttgcacggatttgggatatgcgtagactacaa
ccagggggttcccttcatgaacttgcgcacagaagagttgtcaactctgcttatttctct
cgtgtgtcgggtacaaaaatcctcacgacgtctcaggacaaccgtatacgagtatgggat
tctatctttggtaatttggatttgccgagcagagagattgttcacagtcacgatttcaat
cggcatctgacgcctttcaaagctgagtgggatcctaaggatccatctgagtcccttgtt
gtcattggtcgttacataagtgaaaactacaatggtgctgctcttcatccgattgatttc
atagatgtgagcactgggcaactagttgcagaggttatggatccaaacatcacaactatc
agtccggtcaccaagttacatccgtacgatgatgttttggtttccggaagttcaaggtcg
cttttcatctggaagccaaaggaaaaaacagagatggttgaagggaagaaggaccaaaag
attgtaacgtgtggaggaggaggagatggcaagaagaaggggaaaggaaagcggaagccg
ggtagtgatgaagatgactcagacgacgatatgtttagctctaaaggcaaaagcatcaaa
gttcagaagtcccgaatcaaagtaactaagagcaatgggaaggcaaaacagagacaggga
tga
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