KEGG   Tarenaya hassleriana (spider flower): 104814912
Entry
104814912         CDS       T04125                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03420  Nucleotide excision repair
thj04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104814912
  09124 Replication and repair
   03420 Nucleotide excision repair
    104814912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:thj04121]
    104814912
   03400 DNA repair and recombination proteins [BR:thj03400]
    104814912
Ubiquitin system [BR:thj04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104814912
DNA repair and recombination proteins [BR:thj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104814912
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EIPR1 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd WD_LRWD1 WD40_RFWD3 Beta-prop_IFT140_1st AvrPtoB-E3_ubiq
Other DBs
NCBI-GeneID: 104814912
NCBI-ProteinID: XP_010541451
LinkDB
Position
Unknown
AA seq 560 aa
MDSARTKRRRQPDFVIARDTDSEASSSDDDEEEEEAFEESEPYENGRETELGLSAKKTKK
VPITVKLKKVCKVCKQAGHEAGFRGATYIDCPMKPCFLCKMPGHTTMTCPHRVTTEHGVI
PASHRNTKNPIELVFRRQLQSRIPPIKPEFVIPDQIHCGVLRYHSRRVTCVEFHPTKNHI
LLSGDKKGQVGVWDFGRVYEKITYGNIHFIQVNNMKFSPTNNDMVYTAASDGTVGYTDLE
TGISLTLLNLNPDGWQGPSTWKMLYGMDINSEKGVVLVADNFGFLHLVDHRTHCRVGEPI
LIHKQGSKVVGLDCNPVHTELLLSCGNDHFARIWDMRRLQPGGSLHELAHRRVVNSAYFS
RVSGTKILTTSQDNRIRVWDSIFGNLDLPSREIVHSHDFNRHLTPFKAEWDPKDPSESLV
VIGRYISENYNGAALHPIDFIDVSTGQLVAEVMDPNITTISPVTKLHPYDDVLVSGSSRS
LFIWKPKEKTEMVEGKKDQKIVTCGGGGDGKKKGKGKRKPGSDEDDSDDDMFSSKGKSIK
VQKSRIKVTKSNGKAKQRQG
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggactcagccagaaccaaaagaaggaggcaaccagattttgtaatcgccagagataca
gattccgaggcaagctcctctgacgatgacgaagaagaagaagaggcttttgaagaatct
gaaccctacgaaaatggaagggaaactgaattgggactctcggcgaagaagacgaagaaa
gtacccattaccgttaagctcaagaaagtttgcaaagtctgtaagcaggctggtcatgaa
gccggatttagaggggctacatatattgattgtcccatgaaaccttgcttcttatgcaaa
atgcctggccacaccacgatgacatgtccccatagagtcaccaccgagcacggagtaatc
ccggcctcccaccggaataccaagaatccgatcgagcttgtgtttagacgccaacttcaa
tcgagaataccccctatcaagccggaatttgtgatcccagatcagatacattgcggagtt
ttacgataccatagcagacgagttacatgtgtggagttccatccaactaagaaccacatt
cttttgtctggagataagaaagggcaagttggagtctgggattttggtagagtatatgag
aagatcacgtatggaaacatacacttcatacaagttaacaacatgaagtttagccccacg
aataatgatatggtatacactgcggcctctgatggaactgttggttacaccgatctggag
actggaatctcgttaaccttgcttaatctcaatcctgatggatggcagggtccaagcact
tggaaaatgctatacggtatggatattaattcagagaaaggtgtggtgcttgttgctgac
aatttcggttttcttcacctggtggatcatcgaacccactgcagagttggtgagccgatt
ttgatacacaagcaaggaagcaaagttgtcggtcttgactgcaacccagttcacacagag
ctgcttctgagttgtgggaacgatcattttgcacggatttgggatatgcgtagactacaa
ccagggggttcccttcatgaacttgcgcacagaagagttgtcaactctgcttatttctct
cgtgtgtcgggtacaaaaatcctcacgacgtctcaggacaaccgtatacgagtatgggat
tctatctttggtaatttggatttgccgagcagagagattgttcacagtcacgatttcaat
cggcatctgacgcctttcaaagctgagtgggatcctaaggatccatctgagtcccttgtt
gtcattggtcgttacataagtgaaaactacaatggtgctgctcttcatccgattgatttc
atagatgtgagcactgggcaactagttgcagaggttatggatccaaacatcacaactatc
agtccggtcaccaagttacatccgtacgatgatgttttggtttccggaagttcaaggtcg
cttttcatctggaagccaaaggaaaaaacagagatggttgaagggaagaaggaccaaaag
attgtaacgtgtggaggaggaggagatggcaagaagaaggggaaaggaaagcggaagccg
ggtagtgatgaagatgactcagacgacgatatgtttagctctaaaggcaaaagcatcaaa
gttcagaagtcccgaatcaaagtaactaagagcaatgggaaggcaaaacagagacaggga
tga

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