Tarenaya hassleriana (spider flower): 104815087
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Entry
104815087 CDS
T04125
Name
(RefSeq) endoribonuclease Dicer homolog 3 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thj03036
]
104815087
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104815087
microRNA pathway
RISC loading complex
104815087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
ResIII
PAZ
dsrm
SNF2-rel_dom
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
104815087
NCBI-ProteinID:
XP_010541702
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MHSAAETEEKEEQRGERANLLKRKICEIDGDQPPDRLMDGPDPPSAKRVSSSSTPLIINP
SGYETKVYEVARERNTIAVMETGTGKTVVAIMLIRDMCLTVKSSDDFRSRRLVIFLAPSV
SLVKQHCRDIKLYSNLEVENYYGGRGVDKWTLEHWEKEVNEHDVLVMTPQIFSEALRNSY
LKLHMVCLVVIDECHLATGNHPYAKIMKEFYRKSTDKPKIFGLTASSVDRKGQVSELESI
LDSKVLSMLDTDLAKDSEYQCLKLTLPPETNVYRVEATGALITLDSSIDVLRQYCKNLPT
DGYKPQLKFELSFPEELSYIYTVTFPASAAVQKIVGPRSTNEQLAMQLACIEACKKLHQL
GALDDHLLPCTTLSKDKVSSAKSKSSSAGAGTTKRKELHGTTCVNALSGTWGEKLDGAVF
QAYRIDFSCDVARELYSSFVLLIESALDGDVGNVEINLYLVRKFVKASVSSCGQRYFTHE
EMVKAKCFQEFFFNGLFGKLFVGSKSSEMKREFLLHNETKSLWDPSYMFLLLPLEMDHIV
PRGESWRINWSAINSCVSAIEVLKKNSPLELRVNDGNHCKTLPGYEVSSEDEYGRKTNLI
HFSNGSFDQDSLKEMTVTAIHTGRVYTVVEVEKDSSAKSLFEGGISPEYSSYTDYYYKKY
GIVLMHPDQPMLRLKQSHNAHNLLVNFNEEGDMKAGPRGDLFKERKPQIHSHLPPELLVI
IEVPRIVIRSIYLMPSVMHRLETLMLASQLRKEIGCHIDNFSIPSSLILEALTTLLCCET
FSMERLELLGDSVLKYTVSCNLYFKYPDENERQLTGRRKSIISNANLHRLATIRKLQGYV
RNGAFEPRRWTAPGQRSLFPVPCKCGILTKEVPLDPKFFSEDLKVKLGKSCDMGHRWMVS
KAISDCAEALIGAYYVSGGLTPALHVMKWLGVDVEFDPKIVDEALNIASLQSYIPKNDEL
TELQAKIGHEFSVKFLLKEAITHKTSDEPYSYERLEFLGDSVLDILITRHLYKTYTETGP
GYMTDLRSANVCNENFAQVAVRKNLAGHLQHCCSVMEAQINEYLRSFPEPDETGRTIPSI
QGPKALGDLVESITAALLIDTRMNLSEVWRLIESLLSPLVTPENLELPPFRELSELCDSF
GYPICVKYTNHGEKIHSRIQLQLHDVRLIGEGSERSTKLSKGKAASSLLKQLEERNISRN
MSLTRDEQIGGSDSSRINRAVSPSDSTGIPVIGPISTMKGGPRTALFSFCKKHLWPTPTF
ETTEENSRTAMEFGEGAEKRTSFSSFTSVVTIQVPSKEEAVVKWSGEARPDKKSSYDSAV
VEALYELERRRFLVILK
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgcattccgcggcggagacagaggaaaaggaagaacaacgaggagaaagggctaatctt
ctcaagagaaaaatctgtgaaatcgacggtgatcaacctcccgatcgtctaatggacggt
cctgatcctccctctgccaagagagtttcctcttcttctactcctctgataatcaacccc
agtggttatgagacgaaagtgtacgaggttgcaagggagaggaacacgatcgctgttatg
gagacaggaacagggaagacagttgtagccattatgctgatcagggacatgtgcctcact
gtcaaatcttctgacgatttcagatccagaagacttgtcatattcttggcaccgagcgtc
agtcttgtgaaacagcattgccgtgatatcaaactgtactcaaacctggaggtcgagaat
tactatggaggcagaggagttgacaaatggacgttggagcattgggaaaaggaagtaaac
gagcacgatgttctagttatgactcctcagatattttcagaggcccttagaaattcatac
ctgaaactacatatggtatgccttgtagttatagatgaatgccaccttgccactgggaat
catccatatgcaaaaataatgaaggaattttatcgcaaatccactgacaaaccgaagata
tttggattgactgcttcttccgtcgatagaaaaggtcaagtttctgaacttgagagcatc
ttggactcaaaggtactgtcaatgctagatacagatttagccaaagattcagaatatcag
tgcttgaaattaaccctacctccggagacaaatgtctatcgagtggaggcaacaggggct
ttgattactctagattcaagtatcgatgttctacgtcagtactgcaagaatcttcctact
gatgggtacaagccccagttaaagtttgagttgtcatttcccgaggagttgtcttacata
tacacagtgacatttcctgcctctgctgctgtacaaaagatagttggtccaagaagcacg
aatgagcaattagcaatgcaacttgcttgtatcgaagcatgcaagaagctacatcagtta
ggtgcattggatgatcaccttttaccatgcaccaccctatccaaagataaggtttcctct
gctaaaagcaaatcttcttcagccggtgcagggacgacgaaaagaaaggaattacatgga
acgacctgtgtaaatgcactgtccggaacttggggagaaaaacttgacggtgccgtcttc
caggcttatagaattgacttttcatgcgatgttgctagagagctatactcaagtttcgtt
cttttgattgagtcggcccttgatggcgatgttggaaacgtcgagataaatctttatttg
gtcaggaagttcgtgaaggcttctgtctcatcttgtggccaacggtattttactcatgag
gagatggtgaaagcaaagtgttttcaggagtttttctttaatggtctattcgggaagttg
ttcgttggatctaagtcatcggaaatgaaaagggaatttttgcttcataacgaaacaaaa
tctctctgggacccatcctacatgtttcttctactgcccctcgaaatggatcatatagtt
cctaggggagaatcatggagaatcaactggtctgctatcaattcatgtgtctcagccatt
gaggtcctcaagaaaaactctcctctggaacttcgggttaacgatggaaatcattgcaaa
actctcccgggttacgaggtctcatcagaggatgaatatggaaggaaaacaaatttgatt
catttttccaatggttcatttgatcaagacagcctcaaagaaatgacggtaacagcaatt
catactggaagggtatacactgtagtcgaagtggaaaaagattcttctgctaaaagcctg
tttgagggcggtatctcaccggaatattctagttacaccgactattactacaaaaaatat
ggaattgttttgatgcatccggatcagcccatgttgcggttaaagcagagccacaatgca
cataaccttctagtcaatttcaatgaggaaggtgatatgaaggcaggaccgagaggtgac
ctatttaaagaaaggaaaccccaaatacattcacatctgccacccgagctcttggtaatt
atcgaagtacctcgtatcgtaatacgttcgatatacttaatgccttcggtgatgcaccga
ctggaaaccctaatgttggcgagccagctgaggaaggagattggttgtcacatcgataat
ttcagtattccgagttcattgattcttgaagcacttacgacactactatgctgcgagaca
ttttccatggagagactggaactgctcggggattcggttctgaaatataccgtgagctgt
aatttatacttcaagtatcccgacgaaaacgagcgacaactaacgggacggcggaaatca
atcatttctaatgcgaaccttcatcggttggcaaccattcgcaagttacagggatacgta
aggaacggtgctttcgagccccgtcgttggacagcgcctggtcaacgttctctttttccc
gttccttgtaaatgcgggattttgacgaaagaagtacctctggacccgaaattcttttct
gaagacctaaaagtcaaactcgggaaatcttgtgatatgggtcatagatggatggtgtcg
aaggccatatcagattgtgccgaggctctaattggcgcgtattacgtgagcggtggattg
actccggctcttcatgtgatgaaatggctcggtgtcgatgtcgagtttgacccgaaaata
gtcgacgaagctctaaatattgcgtctctacaatcttacatccctaagaacgatgaactt
acggagttacaggctaagatcggacatgaattctcggttaagttcctactaaaagaggct
ataacacacaagacttctgatgaaccctattcttatgagaggcttgaatttcttggagat
tctgtgctggatatccttattacccggcatctatataagacctatacagagacaggcccg
ggatatatgactgaccttcgatctgcaaatgtatgtaacgagaattttgcccaagttgcg
gtgaggaagaatctggctggccaccttcagcactgttgttcggtaatggaggctcaaata
aacgagtacctgagatcctttcctgaacctgatgagaccggtagaacaattccctcgata
cagggtcctaaggctctaggggacttggtggagagtatcacggctgcgttactgatcgat
acaagaatgaatctgagtgaggtatggagactgatagagtcgttgctttctccgctagtg
actccggaaaatcttgagctgcctccattccgggaattgagcgagctatgtgattctttc
gggtacccgatctgtgtgaaatacacgaaccatggcgagaagatacactcgaggatccag
ttgcagctccacgatgttcgtttgatcggagaaggatcagaacggagtactaaactatcc
aagggaaaagccgcttcttctctgctgaaacaactagaggagagaaacatttctcgcaac
atgtcgttgacgagagacgagcagattggtggaagtgattcttctcgtatcaacagagct
gtatccccttcagattcaactggaattccagtcatcgggcctataagcacaatgaaaggc
gggcctcggacagcacttttcagcttctgcaagaaacatctgtggccaacacccaccttc
gagacgacagaggagaattcccggactgcgatggaattcggggaaggtgccgagaaaaga
acgagctttagcagtttcacgtcggtcgtgacgattcaggtaccgagcaaggaggaagct
gttgtgaagtggtcaggagaagccaggccagacaagaagagttcctacgactctgctgtc
gtggaggctctctatgagctcgaacgccgtcgtttcctcgttatcctcaagtaa
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