Tarenaya hassleriana (spider flower): 104815496
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Entry
104815496 CDS
T04125
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104815496
03009 Ribosome biogenesis [BR:
thj03009
]
104815496
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104815496
Spliceosome [BR:
thj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104815496
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
Pre-60S particles
Helicases
104815496
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ARTD15_N
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104815496
NCBI-ProteinID:
XP_010542208
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MGSSFLFEPPSDEERDISEHDDESHDEDVDEESESEELQGRVEEEDDGHDDEEKPTTKRV
RDKQSPWDFAAYSSSVGEEHARRHTTSLDEKISKVRQQHSLPIPGDNEDDSASDSEPDKQ
EEYRSDDDETGRPNEEDVSAKPFFAPVEGVSFHANSFIELNLSRPLLRACEALGYAKPTP
IQAACIPLALTGRDICASAITGSGKTAAFALPTLERLLFRPKRVAATRVLILTPTRELAV
QIHSMIQKIAQFTDIKCGLIVGGLSVKEQEVVLRSMPDIVVATPGRMIDHLRNSMSVHLD
DLAVLILDEADRLLQTGFATEIQELVRLCPKRRQTMLFSATMTEEVKELVKLSLTKPLRL
SADPSARRPAGLTEEVIRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILF
GLTGLRAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPRE
LDSYVHRVGRTARAGREGYAVTFVTDSDRPLLKSISKKVGSKLKSRVVSEQSITKWCQII
EQMEDQVSVVLQEEREERALRKAEMEAAKAENMIAHRDEIFSRPKRTWFLTEKEKRLVAK
TEKESAGKGSGSEMMSAEQAEELKMKEKRRREREKNLPRKKRRKLEAAREMLEEEGEEDE
EEEEGEEQRPQKSRGRDLKKSKKEEGGEKKGISMVEVGYRRAKAVKAKKRALDSGKMERS
SGKKQSNSRPRQRNQSRTEEMKELFQSDMSEKKQNRTGPKPRKKSVNSFKSKSRYKRR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgagtttcctgtttgaacctcccagtgatgaagagcgcgatatctctgaacac
gacgatgaaagccatgacgaagacgtagatgaagaatccgaatcagaagagcttcaaggt
cgggttgaagaagaggatgacggtcatgacgatgaggagaaacctaccacgaaacgagtt
cgtgacaagcagtctccgtgggacttcgcagcttattcgagctcggtgggggaagaacac
gcacgccgccacaccacttccctcgacgagaagatctctaaagttcgccagcaacattca
cttccaatccctggggacaacgaagacgacagcgcctcagattccgagcccgacaaacaa
gaagaataccgatcagacgacgatgaaacaggtcggccaaacgaagaagacgttagtgcc
aagccgttcttcgctcctgtagaaggagtttcctttcatgccaattcttttattgagttg
aatctatcccgtccactgctccgagcttgcgaagctctggggtatgcgaaacctacccct
attcaggcggcatgcatacctttggcacttactgggcgtgatatttgtgcgagcgccatc
actggatcagggaagactgcggcgtttgcattgcctactttagaaaggctattatttcgt
cctaaacgagttgcagcaaccagagttcttattcttacccctacaagggaattggctgtc
cagatacacagtatgattcagaaaattgctcagtttacggatatcaaatgcgggttgatt
gtaggagggctttctgtaaaggaacaagaggtagttctgaggtcaatgccagacattgtt
gtggcaactcctggacgcatgatagatcatttgcggaattctatgtcagtacatttggat
gaccttgcagttttgattctcgacgaagcagatcgtctcctccagactgggtttgccact
gaaatacaggagctggttcgcttatgccccaagagaaggcaaacaatgctcttctcagct
acaatgactgaagaagttaaagaacttgtcaaactttccctgacaaaaccattgcgactc
tcagcggacccatcagcaagaaggcctgcgggattgactgaagaggtgataagaatacgc
aggactcgtgaggcgaaccaggaagctgtccttctttcattgtgcacaaggacttttaaa
tccaaagttataatcttcagtggaacaaagcaagctgctcatagattgaagattttattt
ggactaactggtctcagagcagctgagcttcatggaaaccttactcaagcacaacgcctt
gattctttggaacttttcaggaagcaagaggtggattttctcattgcgaccgatgtggct
gctcgagggcttgacatcattggtgttcaaacagttataaactatgcatgtccacgtgaa
cttgacagctatgttcatcgggtaggtaggacagctagggctggaagggaaggatatgca
gttacattcgtgactgacagtgaccgaccccttttgaaatccatatcaaaaaaggttggt
tcaaagttgaaaagccgagtcgtctctgagcaatcaatcactaagtggtgtcagataatt
gagcaaatggaagatcaagtttctgtcgttcttcaagaagagagggaagagagagcacta
aggaaagctgaaatggaagctgcaaaggcagagaatatgattgcacacagggatgagata
ttttcacgcccaaaaaggacttggttcttgacagagaaggaaaagagacttgtggccaag
actgagaaggaatctgctgggaaaggttcgggaagcgagatgatgagtgcagagcaagca
gaggaactcaagatgaaggagaagaggagacgggaacgcgagaaaaatctgccaaggaaa
aagcgtagaaagctggaagcagcaagagagatgctagaggaggagggagaagaagacgag
gaagaagaagaaggagaagagcagcgaccacaaaagtcaagaggaagggatttgaagaag
agcaagaaggaggagggaggagagaagaagggaatatcgatggtagaagttggatacagg
agagccaaggcagtgaaagcaaagaagagggctttggactctggaaagatggagagaagt
tcggggaagaaacagagcaacagcagacccagacagaggaaccaatcaagaaccgaagag
atgaaagaactgttccaaagcgacatgagcgagaagaaacagaaccgaactggacccaaa
cctcgtaagaaatccgtcaactccttcaagagcaaatctcgatataaacgtaggtaa
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