Tarenaya hassleriana (spider flower): 104815682
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Entry
104815682 CDS
T04125
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104815682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104815682
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104815682
mRNA degradation factors
5'-3' decay
Decapping complex
104815682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
104815682
NCBI-ProteinID:
XP_010542491
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MASSPGNTNPHNPPPFDISNFFKPSPSPYPTPPGSYPPPAGPFLHNQYHQQLYTPPGIAG
QLSPAASSAALAQQQQQEAPPASSSAAANLHPPRSLSYPAPPLNLQSPRANHNPGTHILA
LLNNNNGGSANSGATANQDPSPQHPGLHPHEVARPFPGGPVPIRAQSCKLPKGRRLVGEH
VVYDVDVRLQGEIQPQLEVTPITKYGSDPQLVVGRQIAVNKVYICYGLKGGNIRVLNINT
ALRSLFRGHTQRVTDMSFFAEDVHLLASISLEGKVFVWKISEGSEGEDQPQISGGMVLAV
QILGEEDTKHPRVCWHSHKQENLVVSIGKNILRIDTTKVGKGAVYSAEAPLQCLLDKPID
GVQLVGKHDGEVTDLSMSQWMKTRLVSSSVDGTIKIWEDRKAQPLAVLRPHDGHPVNSAT
FMTAPERPDHIILITGGPLNREMKIWVSAGEEGWLLPTDSESWKCIQTLDLKSSAEPRAE
EAFFNQVVALSQSGLLLLANAKRNAIYAVHLDYGSCPVETRMDYLAEFTVTMPILSFTGT
NDPPEEHIVKVYCVQTQAIQQYTLDLCQCLPPPTENMGLEKSDSTVSREVNLAEGTSDAA
GQKPTELPSADSMLKPPVQVSRSDSASALRFSGSSASMETMSQEVFPTNGEHKISGLPSA
ASDTDIGYAPSPPLPLSPRLSRKLSGYHTPANTVESALPQGEFGGKPPATDYSQMDGGQK
SLSDVSSVDDGSRSDKKVTPDDAAAIRSPPIVFKHPTHLVTPSEILMGVSSAEATIATEG
KRDKDANAQDVVDTDTDSAEVEVKEVGEAGSTQNDGINYHEETENRVSENREKIFCSQVS
NLSTEMARDCHAVMEESYAPEESKALGQSSEAGEEGGVDSRGASGKLPEVSSSMLPQPAA
SNSKGRKQKAKNSYGSSLLSTSSNAADLAESYNEGWNSGLPTTESLLPQFLAMQEMMNQI
MASQKEMQRQLSNAVNGPVTKEGKRLEVALGRTIEKVTKANTDALWARFQEETAKNEKTL
RDHTQQIVNAMTNFMNKELNAVFEKVVKKEFTAIGPAIVRSVTPAIEKTISSAITESFQR
GIGDKAINQLDKSVNAKLEATVARQIQAQFQTSGRQALQEALRSSLEASVIPAFEMSCKT
MFEQVDATFQKGIAEHTSAAQQQFESVHSQLAHTLRETINSASSVARTLSCEITDGQRKL
IELAAAGANPGASNPLVTQLSNGPLGALLEKVEAPPDPTKELARMVSERKYEEAFTSALQ
RSDVSIVSWLCSQVDLQGLLAMVPLPLSQWVLLSLLQQLACDIGKETSRKLGWMMDVGAA
INPGDQMIALHARPILEQVYQILHHHRTTPGLSGGDQSSIRLIMHVINSMLMSCK
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcaccaggtaacactaaccctcacaatcctcctcccttcgatatcagcaat
tttttcaaaccctcgccaagcccttaccctacgccaccgggttcttatcctccacccgcc
ggaccttttcttcacaaccagtatcaccagcagctctacacgccgcctggaatcgctggc
caactatctccggcggcgtcctcggcagcgctggcacagcagcagcaacaggaggcgcct
ccggcttcctcatccgccgctgctaacttgcacccgccgagatcgctttcctatcctgcg
ccacctctcaacctccaatcgccccgagcgaatcacaaccccggtacgcacatcctcgct
ctcctcaacaataataatggcggaagcgccaacagtggcgccacggccaatcaagatccg
tcgcctcagcacccagggctgcatccacacgaggtcgcacggccattcccgggcggtccg
gttccaatccgtgctcagagctgtaagctacccaaaggaagacgcttggtcggcgaacat
gtggtgtacgatgtggacgtgagattgcagggagagattcaaccgcaactcgaggtgact
ccgattaccaaatacgggtcggatccgcagctcgtagtgggtcgacaaatcgcggtgaat
aaggtctacatatgctacggtctgaagggagggaatattcgggttctcaacataaacacc
gcattgagatctttgttccgcggccatactcagagagtaacggacatgtcattctttgcg
gaagacgttcacctgttggctagcattagtctagagggaaaagtttttgtatggaaaatt
tctgaaggttcagaaggagaggatcagccccagatatctggaggaatggttcttgctgtt
cagatattaggggaggaggacacaaagcatccacgtgtgtgctggcactctcacaagcag
gaaaatttggtggtttcaattggaaaaaacatattgcggattgacactaccaaagttggc
aaaggtgcagtatattcagcggaggcacctcttcagtgtcttcttgacaagccgattgat
ggcgtgcaacttgttggtaaacatgatggagaagttactgatttgtcgatgtcccagtgg
atgaaaactcgcttggtttcttcttcagtggatggcacgattaagatatgggaagaccgt
aaggcacaaccacttgcagttttaagaccacatgatggtcatccagtcaattcagccaca
ttcatgacagctcctgagagacctgatcacatcatacttatcacggggggtcctctaaac
cgagaaatgaagatttgggtctcagctggtgaggaagggtggctcctaccgactgattct
gaatcatggaagtgcatccagacacttgacctaaaaagttcagctgaaccacgagctgaa
gaggcgtttttcaaccaagtcgttgcattgtctcaatcagggctgcttttacttgcaaat
gcaaaaaggaacgccatctatgccgtgcatttggactatggttcttgtccagttgagaca
aggatggattacttggcagaatttacagtcactatgcctatattgagttttacagggaca
aatgatcctcctgaagagcatattgttaaggtttactgtgttcagactcaagctatccag
caatatactttagacttatgccagtgcttgccccctcctacagagaacatgggtttggag
aagtcagattcaactgtctcacgggaggtgaatcttgctgaaggcacatcagatgcagct
ggacagaagcctacagaactgccttcagctgattcaatgctcaaaccacctgtccaagta
agtagatcggacagcgcaagtgctcttaggttttcagggagttctgcatcaatggagacc
atgtcacaagaagtttttcctaccaatggtgaacataaaatttctggcctcccatctgca
gccagtgatactgatatcgggtatgctccttctccaccgcttcctctaagtcctaggctg
tcacggaaactttctggttatcatactccggcaaataccgttgagtcagcactccctcag
ggtgagttcggcggtaaacctccagccactgattattcgcaaatggatggtggccaaaaa
agtttatcagatgtgtcttctgtagatgatggctcaaggagtgacaaaaaggttacacct
gatgatgcagctgcgattcgaagcccaccaattgttttcaaacaccccactcatcttgta
acaccttcagagatattgatgggtgtttcatctgctgaagccaccattgctactgagggc
aagagagataaagatgcaaatgctcaggacgttgtggataccgatacagatagtgcagag
gtagaggttaaagaagtaggtgaagcaggatcaactcagaatgatggaattaactatcac
gaagaaactgagaaccgtgtatcagaaaatagagagaagattttctgctcacaggtctca
aatctcagtactgagatggcaagagattgccatgctgttatggaggagagttatgcacct
gaggaatcaaaagcacttggtcaatcttctgaagctggggaggaaggtggtgttgactca
cgaggtgcatctggaaagcttcccgaggtttcatcaagtatgcttccccagccagcagct
tcaaatagcaaagggaggaaacagaaggctaaaaattcatatggttccagtttgttgtct
acatcgtcgaatgctgccgatctggctgagtcttataatgaaggttggaactcaggtctt
ccaactacagagtcactattgcctcaattcctagctatgcaagagatgatgaatcagata
atggcttcacagaaggagatgcagagacaactatcaaatgctgtcaatggtcctgtcact
aaagaaggtaaaagactagaagtggctttaggaagaacgatagagaaagtcaccaaggcg
aacactgatgctttatgggcccgtttccaagaggagacagctaaaaatgagaaaacattg
cgtgaccacacacagcaaatagtaaatgcaatgacgaacttcatgaacaaagaattgaat
gctgtttttgagaaagtggtaaagaaagaatttactgcaatcggaccagctatagtccgt
tcagtaacaccagctattgagaaaacaatatcgtcagcgatcaccgagtccttccagaga
ggaattggggataaggccatcaatcaactcgacaagtctgtcaatgcaaaacttgaagct
actgtagccaggcaaatccaagcgcaatttcagacctcgggcaggcaagccctccaggag
gctctcaggtccagtttggaggcttcggttatccctgcctttgagatgtcatgcaagacc
atgtttgagcaagtagacgccaccttccagaaagggatagccgagcacacaagtgcagcc
cagcaacagtttgaatctgtacattctcagctcgcacatactttaagggaaaccattaat
tctgcttcctcggttgcgcgaacactaagttgtgaaataacagatggtcagaggaaactt
atagaacttgcagctgctggagcaaacccaggtgcatcaaatcccttggtcactcaacta
agcaacgggcctttgggtgccctccttgaaaaggttgaagcgcctccggatccaacaaaa
gaattagcccggatggtgtcagagcgcaagtacgaggaagccttcacgtctgctctacag
aggagtgacgtctctatagtctcatggctatgctcccaggtggatctgcaggggctactg
gcgatggtgcccctgccgctgagccaatgggtactgctgtcacttctgcaacagctagcg
tgcgatattgggaaggagacgtcgagaaagctgggatggatgatggatgtgggtgcggcc
ataaacccgggagaccagatgatagctctgcacgcaaggcccatcctggagcaggtttat
cagatccttcaccaccaccgcaccacccctggcctctcaggaggtgaccaatcctctatc
cgccttatcatgcacgttatcaactccatgcttatgagctgtaaatga
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