Tarenaya hassleriana (spider flower): 104815950
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Entry
104815950 CDS
T04125
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104815950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104815950
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104815950
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104815950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
104815950
NCBI-ProteinID:
XP_010542878
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MVVRKLQLPLNQTQKIRLERALERLQSLSSTANSDTSVIVADSIPVNYEDAFLKGHGTSE
INGEVVATLCGVVERVDKLVYVRALRARYKPEVGDIIVGRVIEVAQKRWRLEINFSQDAV
LMLSSMNMPDGIQRRRTAVDELNMRNIFEENDVVCAEVRNFQHDGSLQLQARSQKYGKLE
KGQILKVDPYLVKRSKHHFHHVEQLGIDLILGCNGFIWVGEHVEVRDPVMADEQKISSSG
VKKEQKHTPLETRQSICRIANAIRVLSNLGFSLTLEVITETVNLSTSMNMDVHDMIGPEF
HVVAAENEAERRRAKRKR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgagaaagctacagctaccgctgaaccagacacaaaagataaggttggagaga
gccctcgagcggcttcaatcgctttcgtcgacggccaactccgacacctccgtcatcgtc
gccgactccattcccgtcaactacgaagatgcctttctcaaggggcacggtacttcggag
atcaatggcgaggtcgtggcgacgctttgcggagtggtggagcgcgtggataagctcgtc
tacgtacgcgcgttgagagccaggtataagcctgaggttggggatatcatcgtaggccgt
gttattgaggttgctcaaaaacgttggagattggagatcaactttagccaggatgctgta
ttgatgctttcttccatgaacatgcccgatggtattcagagacggaggacggcagtggat
gagctcaacatgaggaatatcttcgaggaaaacgacgttgtgtgtgccgaagtacgcaac
ttccagcatgacggcagcttgcagttacaagcaagaagtcagaagtatgggaagctcgaa
aagggtcaaatcctgaaggtggatccttatctggtgaagagaagcaaacaccattttcac
cacgttgagcagctcgggatcgatctgatcctcggttgcaatggtttcatatgggttggg
gagcatgttgaagtcagagatcccgtgatggcggacgaacagaagatttcgtcttccggg
gtgaagaaagagcagaagcacactccgctcgagacaagacagagcatatgcaggatcgca
aatgccattcgtgttctctctaacttaggcttcagcctgacgctagaagtgataacggag
acagtgaatcttagcacctccatgaatatggacgtacacgacatgattggacccgagttc
catgtcgtcgctgcagagaacgaagcggaaagaaggcgtgcaaagaggaaaaggtaa
DBGET
integrated database retrieval system
