Tarenaya hassleriana (spider flower): 104816099
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Entry
104816099 CDS
T04125
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104816099
Spliceosome [BR:
thj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104816099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
TPR_16
TPR_MalT
NRDE-2
UTP6_C
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
104816099
NCBI-ProteinID:
XP_019058338
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MGDNETMAAEASGAVNYTSAGYNSSPYGNYSASAPPVESTEQESANSVHESNAANIGSSQ
SADNNSLVNGSVVEGGTAMPVENGNATDNEVATVPVSEHGDASGPTLSPEEERLWNIVRA
NSAEFNAWTALIEETEKVAQDNITKIRKIYDAFLAEFPLCYGYWKKYADNEARVGAMDKV
VEVYERAVQGVTYSVDIWLHYCIFAINTYGDPDTIRRLFERGLAYVGTDYLSSPLWDKYI
EYEYMQQDWGRLAMIYTRILENPIQNLDRYFNSFKELAETRPLSELKSAEEAVTGTGSTA
SAGGDTTESAQSESIGKADEGQFQADVSTEESPKPASSGSTDVEELKKYVTIREEMYKKA
KEFESKIIGFEMAIRRPYFHARPLNVAELENWHNYLDFTERDGDLNKVVKLYERCVIACA
NYPEYWIRYVLSMEASGSIDLAENALARATQVFVKRQPEIHLFAARFKEQNEDIAGARAA
YQLVHSEISPGLLEAIIRHANMERRLGNLDDAFSLYEQAIAIEKGKEHSPILPMQYAQYS
RFTYLVSGDAEKARKILVEALDHVQPSKPLLEALIHFETIQPPPRQIDYLQPLVEKFIMP
NTDTQNTASSAEKEELSSIYIEFLGLFGDVKSLKKAEDQHAKLFLHHRSTSELKKRNAED
FLSSDRTKMARIYGGTPPAQSIPGAYSNAQNQWAGSYAAQPQTWPPAQAPVQPQPWNPAY
GQQATYGAYGGYPAGHAAPQAPTSVPQAAAYGAYPSTYPAQTYPPQSYAPPTVAAALVAP
VQQPASAPQAYYGATTYY
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaacgaaaccatggccgccgaggcatctggtgctgtaaattatacttctgct
gggtataactcttctccatatggaaattatagtgcttcagctccaccagtggaatctacc
gagcaagagagcgccaattctgtacatgagagcaatgcagcaaacattggttcatctcaa
tctgcagataacaactctttggttaatgggtctgttgttgaaggtggcaccgctatgcca
gttgagaatggaaatgcgacggacaatgaagttgcaactgttccggtgtctgagcatgga
gatgcttctggaccaactctttcaccggaagaggaacgtctatggaatattgtcagggcg
aattccgctgagttcaatgcttggactgcccttattgaagagacagagaaggtagctcag
gacaatataacaaaaatccgaaaaatctatgatgcgttcctagctgaatttcctctgtgt
tatggctactggaaaaagtatgctgataacgaggctcgagtgggggcaatggacaaagtt
gtggaggtttatgaaagagcagttcagggagtgacatattcagtggacatttggctgcat
tattgcatttttgccatcaatacatatggagacccagacaccatcagaagacttttcgaa
cgaggattggcttatgttggaactgattatctgtcctctcccttatgggacaaatacatc
gagtacgagtacatgcagcaggactggggccggcttgccatgatatataccagaatattg
gagaatccaattcaaaatcttgatagatatttcaacagctttaaggaattagctgaaaca
cggcctttgtcagagttaaagagcgctgaggaagccgttactggtacaggttctactgcc
tcagctggtggtgatactactgaaagtgcgcaatctgagtctattggaaaggcagatgaa
ggacaatttcaagctgatgtttccactgaagaatctcctaaaccagcaagttctggctca
actgatgtcgaggagttgaagaagtatgtcaccataagagaagagatgtataagaaagcc
aaagagttcgaatctaaaatcattggctttgaaatggctataaggagaccctatttccat
gcccgtcccctcaatgtggcggaactggagaattggcataactatctggatttcacagaa
agggatggtgatttaaataaggtggtcaaactgtatgaaagatgtgtgattgcgtgtgca
aattatcctgaatattggattcgatatgtattaagcatggaagccagtggaagtatagat
cttgcagaaaatgctcttgctcgagcaactcaagtcttcgtcaagagacaaccggagatt
catctttttgctgctcgatttaaagagcagaatgaagacattgctggtgctagagctgct
tatcaacttgtgcactctgaaatttcacctggactccttgaagcaataattagacatgca
aacatggagcgtcgtctagggaatttggatgatgctttctctttgtatgaacaagcaatt
gctattgaaaaagggaaggaacactctcctatactgccgatgcagtacgctcaatactcg
aggtttacctacttggtttctggagatgctgagaaagccaggaagattctagttgaagca
cttgaccacgtacaaccatcaaaaccactcctggaggctctgattcattttgagacgatt
cagccgccaccaaggcaaattgattacttacagccacttgtcgagaagttcataatgcca
aatactgatactcagaatactgctagttctgctgaaaaggaagagttatcttctatttat
atagagtttttgggcctatttggagatgtgaagtccctaaagaaggctgaagaccagcat
gcaaaactctttttacaccacaggagcacatcagagctgaaaaagcgtaatgccgaagat
tttctctcttcagataggacaaaaatggcaagaatttatggtggcactccgcctgctcag
tcaatacctggtgcttattcgaatgcccagaatcagtgggccggtagctatgctgcacag
cctcagacttggccaccggcacaagcccctgtacaaccgcagccatggaacccggcctat
ggccaacaggctacatatggtgcgtatggtggttatcctgccggtcatgctgctccacag
gcaccaacttcggtgccacaagctgctgcttatggcgcatatccttcaacatatcctgct
cagacgtacccgccacaaagttacgcacctccaaccgtagccgcggcactggtggcgccg
gttcaacaaccggcttccgctcctcaggcttactatggtgctactacttactactga
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