KEGG   Tarenaya hassleriana (spider flower): 104816286
Entry
104816286         CDS       T04125                                 
Name
(RefSeq) THO complex subunit 4B
  KO
K12881  THO complex subunit 4
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03013  Nucleocytoplasmic transport
thj03015  mRNA surveillance pathway
thj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104816286
  09122 Translation
   03013 Nucleocytoplasmic transport
    104816286
   03015 mRNA surveillance pathway
    104816286
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thj03019]
    104816286
   03041 Spliceosome [BR:thj03041]
    104816286
Messenger RNA biogenesis [BR:thj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104816286
    TREX complex
     104816286
Spliceosome [BR:thj03041]
 Complex C
  Other components
   EJC/TREX
    104816286
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104816286
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 104816286
NCBI-ProteinID: XP_010543321
LinkDB
Position
Unknown
AA seq 252 aa
MSSALDMSLDDIIKTNRKSAGSRGGRGSGGRGSGGPGPARRFANRVGNRVAPYSTPVPAP
DSAWQHDMFAGDASMAAGFGVLSAGGASSIETGTKLYISNLDFGVSNEDIKELFAEVGDL
KRYGIHYDRSGRSKGTAEVVFSRRADAMAAVKRYNNVQLDGKPMKIEIVGTNLSAPTPAP
PPLPANRMFGNLNGALRRGRGRGGFAGRPRGGGRGGGRGRGRGRGGEKVSQEDLDADLDS
YHKEAMETEGGN
NT seq 759 nt   +upstreamnt  +downstreamnt
atgtcgagtgctttggacatgtcacttgacgatatcatcaagactaatcggaaatccgcc
ggatcccgtgggggccgcggcagcggtggtcgcggatccggtggtccgggtcccgctcgc
cgcttcgccaaccgcgttggaaaccgagtggcaccgtactcaacgccggtaccagctcca
gattcagcgtggcagcacgacatgttcgcgggcgatgcatctatggcggcgggttttggg
gtcctttctgcgggcggtgcttcttcaattgagactggaactaagctttacatttccaat
ttagatttcggggtttccaacgaagatattaaggagctcttcgcagaggttggtgacctt
aaacgatatggcattcattacgacaggagtggaagatcgaagggtacagctgaggttgtc
ttctccaggagagctgatgccatggctgctgtcaagaggtacaacaatgttcaactggat
ggcaagccaatgaagattgagatagtggggacaaatctctcagctccaactccagctccg
cctcctttgcctgcaaacaggatgtttggaaatttaaatggtgccctcagaagaggcagg
ggaagaggtggttttgcggggaggccacgtggtggtggaagggggggaggtcgtgggaga
ggtagaggtcgtggaggtgaaaaggtgtcgcaagaggatcttgatgctgacctggatagc
taccacaaagaggccatggaaaccgaaggaggaaactaa

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