Tarenaya hassleriana (spider flower): 104816650
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Entry
104816650 CDS
T04125
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104816650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thj03400
]
104816650
Enzymes [BR:
thj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
104816650
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
104816650
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
104816650
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104816650
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
104816650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
AAA_33
Macro
HIT
zf-C2HE
AAA_18
AAA
Zeta_toxin
AAA_16
AAA_22
AAA_17
AAA_29
NPHP3_N
ABC_tran
CPT
Fasciclin
FtsK_SpoIIIE
NB-ARC
nSTAND3
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
104816650
NCBI-ProteinID:
XP_019058413
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MDMEIDDSPEGEKTEPTVVMLVGAPGSGKSTFCDTVMRSSRRPWVRVCQDTINNGKAGTK
AQCLKMAINALKESNSIFIDRCNLDRDQRSEFVKLGGAEVEVHAVVLDLPAQVCISRSVK
RTGHEGNLQGGRAAAVVNRMLQSKELPKLSEGFSRITFCYSDKDVENAVSSYSLLGPKDT
LPSGCFGQKNTNAKSQLGIMKFFKKVNALPGPASKEASTSQESNEKTAKKEENLSLIPSA
QLTSTDIIPTLAFPSISTADFQFDLEKAADIIVEKVEEFLPMLGNARVVLVDLSHGSKIL
SLVKTKASQKNIDSARFFTFVGDITKLRSEGGLQCSAIANAANWRLKPGGGGVNASIFMA
AGSDLEAATRQRANSLLPGKAVVVALPSTCPLVCAEGITHVIHVLGPNMNPKRPNYLNND
YTNGCKILREAYTSLFEGFLSIIKNQSKLPKRRNETTRSGSGGEEIKEDPERNKKCKGLQ
DVVIADESNTGAVGHVRDGGKSKSKGWGSWALALYNIAMQPDRHENIVLEVLDDIVVIND
QYPKARKHLLIIARQEGLDRFADAQREHLQLLQKMHDVGSKWVKRFWDDDPSLVFRLGYH
SVPSMRQLHLHVISQDFDSDHLKNKKHWNSFTSSFFRDSVDVMEEINVQGMATVASEDVL
TAELRCHRCKSAHPSIPKLKSHIRSCRAPFPDHFLQNNRLLTHPDSETD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaaatcgacgactcccctgaaggagagaagacggagccgacagtggtaatg
ctggttggtgcaccgggaagcgggaaatccacgttttgcgacactgtcatgcgctcctct
cgccgcccatgggttcgcgtttgccaggacaccattaacaatggtaaagctggaacaaag
gctcagtgcctaaagatggcaatcaacgccctgaaggaaagcaacagtatctttatagac
agatgcaaccttgacagggatcagcgctcggagtttgttaagctcggaggcgccgaggtc
gaagtccatgcagtggtgcttgatctccctgctcaggtttgtatatctcgatcggtcaaa
cgaaccgggcatgaaggaaatctacaagggggaagagctgcagctgttgtaaataggatg
cttcagagtaaggagcttccaaaattgagtgaagggttttctcggatcacgttttgttac
agtgataaagatgtcgagaatgctgttagctcttacagcttgctcggtccaaaggatact
cttccatcgggctgcttcggccaaaagaacacaaatgccaaaagtcaacttggtataatg
aagttctttaagaaagtcaatgctttgccaggaccagcttctaaagaagctagcacatct
caagaatctaatgaaaagacagcaaagaaagaagaaaatctgtccctgattccttcggct
cagcttacttctaccgatattattcccacgttggcattcccgtcaatctcaacggcagat
tttcagttcgaccttgagaaggcagctgatataattgttgagaaagtggaggaattcctg
cctatgctcggaaatgcacgggttgtcttggtggacctgagccatggatcaaagattttg
tctttggtcaagacaaaggcttctcagaagaacattgactcagcaaggtttttcacattt
gttggggatataactaaacttcgttctgaaggtggtctgcagtgcagtgccatagctaat
gctgctaactggcggcttaaacccgggggtggaggagtaaatgcatcgattttcatggct
gctgggtcagatcttgaggctgcaacgagacaacgagcgaattctcttcttccgggaaag
gccgtagttgttgctctcccttctacctgccctttagtctgtgcggaagggataacacat
gtgatacatgttctgggaccaaacatgaatccgaagcgaccaaattaccttaacaatgac
tataccaacggctgcaagattctgcgagaggcttacacatctctctttgaagggtttctg
tctattataaagaatcaatcaaaattacccaaaagaaggaatgagactactagatcaggt
tctggtggtgaggagattaaggaggatcctgagagaaataaaaagtgcaaggggctccaa
gatgtagtcatagccgatgaatcgaacactggggcagttgggcatgtgagagacggtgga
aagagcaagagtaagggttggggctcatgggcattggctctgtacaatattgccatgcaa
ccggatagacacgagaatattgtgctagaggtattggatgacattgttgtgataaacgac
cagtatccaaaggcaaggaagcacttgctaataattgcaagacaggaaggtctagaccgg
tttgccgatgcccagagagagcatcttcaactgctgcagaaaatgcacgacgtgggatcg
aaatgggtgaagagattctgggatgatgacccctctctggtcttccggttgggttaccac
tcggttccatcaatgcgacaacttcacctacatgttatcagccaagacttcgattccgac
cacttgaagaacaagaaacattggaactccttcacctcctcattcttccgagactcggtc
gatgtaatggaggagatcaatgtccagggcatggccactgtggcaagtgaagatgtttta
actgcggagttgcgttgtcaccgttgtaaaagtgctcacccgagtattccgaagctgaaa
tcgcacataagaagctgccgagctccattccccgaccattttctccaaaacaatcgtctt
ttgacccatcccgactcggagaccgattaa
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