Tarenaya hassleriana (spider flower): 104816790
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Entry
104816790 CDS
T04125
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104816790
Enzymes [BR:
thj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104816790
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
104816790
NCBI-ProteinID:
XP_010544055
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All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MSSLKLQLQVKDNHVTMNNGILQVTLSKPDGIVTGIQYNGLDNLLEVRNEESNRGYWDLV
WSGSGTTGAFDVIRGTSFKVIVEKEEQIELSFTRTWDPSQEGKAVPLNIDKRFVMLRGSS
GFYTYAIYEHSEQWPAFSMAETRIAFKLRKDKFHYMAIADNRQRFMPLPDDRLQDRGQAL
AYPEAVLLVNPIEPEFTGEVDDKYQYSCENKDILVHGWISTEQPLVGFWLITPSQEFRTG
GPHKQNLTSHVGPTSLAVFSSAHYSGDDLVPKFGVGEQWKKVFGPVFIYLNSSTDDDDDP
LWLWDDAKSQTVAEVESWPYDFPASEDFVKADQRGNVVGRLLVRDRYLEEGLIPANRGYV
GLAPPGAPGSWQRECKEYQFWTTSDEEGFFYISGIRPGQYNLYAWVPGFIGDFKYEEIIT
ITPGCYIYVEDVVYQPPRNGPTLWEIGIPDRSAAEFYVPDPSPKYINRLYVNHPDRFRQY
GLWERYSEMYPDGDLVYTIGTSDYGRDWFFAQVTRKKDNKTYQGTTWQIKFKLESVDKAN
SYTLRVAIASATLSELQVRTIRVNDANGSPLFTSGLIGKDNSIARHGIHGLYWLFSIEVP
GSKFVEGVNTFFFTQPRSTSPFQGIMYDYIRLEGPSPPLAFG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctctcaaactccagttgcaagttaaggacaatcatgtcacgatgaacaacgga
attctacaggttacgttatcgaaacccgacggaattgtcaccggaatccagtacaatggc
ctcgataacttgctcgaggttcgtaacgaagaatccaacagaggatattgggacctggta
tggagtggatcaggaactacaggtgctttcgatgtgatacgaggaacaagcttcaaagta
atagtcgagaaggaagaacagatcgagctttcgttcacacgaacttgggatccatcacaa
gaaggaaaagctgtacctttgaacattgacaaaagatttgtgatgcttcgaggttcgtcg
gggttctacacatacgcaatctacgagcattccgagcagtggcctgctttcagcatggca
gaaacccggattgccttcaagctcagaaaagacaagttccattacatggccattgccgat
aatagacaaaggttcatgcctttgcctgatgaccgcttacaagacagaggccaagctttg
gcttaccctgaagctgttctacttgttaaccctatcgaacccgagttcaccggggaggtg
gacgataagtaccaatactcatgcgaaaacaaagacattctcgtccatggatggatatct
accgagcagccgctggtcgggttttggctcatcactccgagtcaagagttccgaaccgga
ggccctcacaaacagaacttgacatcccacgtcggacccacctctcttgccgtattctca
agtgcacattattcgggagacgatctcgtgccaaagttcggtgtcggagaacaatggaag
aaagtttttgggccggttttcatctacttgaactcttctacagatgatgatgatgatcct
ctatggctatgggatgatgctaaatctcagaccgttgcggaagttgagagttggccgtac
gatttcccggcttcggaggattttgtgaaagccgaccaacgtggtaatgtcgttggtaga
ctgcttgttcgagacagatacttagaggaaggtttaattccagcaaatagaggttatgtc
gggttggctccacctggggctcctggttcatggcaaagggaatgcaaggaataccaattt
tggacaacgtcggacgaagaagggttcttctacataagtggaatacgacctggtcaatat
aacctctatgcatgggttcccggtttcatcggagacttcaagtacgaggagattatcacc
ataaccccaggatgttatatatacgtggaagacgttgtttaccagcctccgagaaatgga
ccgacattatgggagattggcatccccgatcggtctgccgctgaattttatgtacctgat
cccagccccaaatacattaacagactctacgttaatcatcccgacaggtttaggcaatac
ggattatgggaaaggtattcggaaatgtacccagacggggatttggtctacacgattggc
accagcgactatggaagagactggttctttgcccaagtcaccaggaaaaaagacaacaaa
acatatcaagggacaacatggcagatcaagttcaaactagagagtgtggataaggcaaac
tcatacaccttaagagttgccattgcatcagccaccctttctgaactccaagtacgtacg
attcgggtgaatgatgcgaatggaagtccgttgttcacgagcggattgatcgggaaggat
aactcgatagcgaggcacggaatacacggtttgtactggttattcagcattgaagtgcct
ggttctaagttcgttgaaggcgtcaataccttcttcttcactcagccaaggagcacaagt
cctttccaaggcataatgtatgattacattcgattagaagggccttctcctcctcttgca
tttggttaa
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