Tarenaya hassleriana (spider flower): 104816791
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Entry
104816791 CDS
T04125
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104816791
Enzymes [BR:
thj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104816791
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
104816791
NCBI-ProteinID:
XP_019058445
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MDLSSHVFSSFVGFLTGPSNRRNLRLRGWIKAFIVFSVLSEIAICQTPPESEQALQLHYQ
DQHVVMDNGILQVTLSNPEGFVTGIQYHGISNVLAYNGSEHDRGYWDLVWNFPGKTTKVT
KGTVDRIEATKLEVIVQNDEQIELSFTRTWNSSLDKAVPVNIDKRFVMLRNSSGFYTYAI
FERLEGWPAVEVDNIRIAFKLNEDKFHYMAISDERQRYMPLPEDRVPPRGQALAYPEAVL
LIDPREPEFKGEVDDKYAYSMESKDLKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFLN
SHVGPTHLTIFHSTHYVGKELIISFEEGEAWKKVFGPVFVYLNSFPQGVDPLLLWNEAKN
QTRIEEQMWPYEFPTSGDFPGSDRRGSVTGRFLISDRYISSEYISGNGSYVGLAAPGDVG
SWQKECKGYQFWTKVDENGHFLIKNVRSGKYNIYGWASGFIGDYHNDTVIDIASGSNIDI
GELIYEPPRDGPTIWEIGVPDRTAAEFYIPNPDPRYTNKLYMDHDRFRQYGLWERYTELY
PDQDLVFDVDADDYTKDWFFMQVTRKVGEGGYNGTTWQIKFKLDKVVNETSSSYKLRIAL
ATANVAELQVRVNDPKTPLLFTTGEMIRFETRIEEQMWPYEFPTSGDFPGSDRRGSVTGR
FLISDRNGIHGVYWLNSVDVPSSSLLRGNNTIFLTQPLAVSPFQGLMYDYIRLESPDPLY
HITIS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggatctctcttcacatgtcttcagttcttttgtcgggtttctcacagggccttcgaat
cggcggaatctgcgactgagaggatggataaaagcgttcatcgtgttttcggtattatca
gagatcgcaatctgtcaaactcctccagaatcagaacaagcattacagttgcattaccaa
gatcaacatgtggttatggataacggcattcttcaagtaactttgtcgaaccccgaagga
ttcgttacaggaattcagtaccatggaatctccaatgtgctcgcatacaacggctcagaa
catgatcgaggatattgggatttggtctggaactttccagggaaaacaacaaaggtcaca
aaaggcacagtggacaggattgaagcaactaagctcgaagtgattgtacagaacgacgaa
cagatcgagctttcttttacgaggacgtggaattcatcattggataaagctgttcccgtg
aatatagacaagaggtttgtgatgctgagaaattcgtcgggtttctacacttacgccatc
ttcgagcgtctggaagggtggcccgccgtggaagtcgacaatatcagaatagcattcaag
ctcaacgaggacaagtttcattacatggcgatatcggatgaaaggcaaaggtacatgccc
ctgcccgaagatcgggttcctccccgaggtcaagccttggcttaccccgaagcagttttg
ctcatcgaccctagagagcccgagtttaaaggagaggtggatgacaagtacgcatactcg
atggaaagcaaagatctcaaagttcatggatggataagcacaaacgactcggtaggtttc
tggcaaatcactccaagcaacgagtttcggtctgcaggaccgctcaagcagttcctcaac
tctcatgtcggtcctacacatctcacgatcttccatagtacgcattatgtggggaaagag
cttataataagcttcgaggaaggtgaggcatggaagaaagttttcggaccggtcttcgtt
tatctcaattcatttccacaaggagttgatcctcttctgctttggaatgaagccaaaaac
cagacaaggattgaagaacagatgtggccatacgagttcccaacttctggggatttcccg
ggctctgatcgacgtggcagtgttaccggtagattccttattagtgaccgatatataagt
agtgagtatatatcgggaaacggctcgtacgtcggattggctgcacccggagatgttggg
tcgtggcaaaaagaatgcaaaggctatcagttttggacaaaggtggatgaaaatggacat
ttcttaataaaaaatgtgagaagtggcaaatacaacatatacggatgggcttcgggattc
atcggcgattatcataatgacactgtcatcgacattgcttcaggttcaaatattgacatt
ggggaactaatatatgaaccaccgagagacggtccaactatttgggaaattggagttccg
gacaggaccgcggcggaattctacattccgaatccggatccgagatacacaaacaaactg
tatatggaccacgatcgattccggcagtacggtctgtgggaaagatatacggagttatat
cccgaccaagacctggtcttcgacgttgatgctgatgattataccaaagattggttcttc
atgcaagtcacgagaaaggtgggggagggaggatataacggaacgacatggcaaatcaag
tttaaattggataaagtggtgaacgaaacatcttcctcctacaaactccgaatcgctttg
gccaccgctaatgttgccgagctacaggtacgagtaaacgatccgaagacgccgttgttg
ttcacgacgggggagatgatacgttttgaaacaaggattgaagaacagatgtggccatac
gagttcccaacttctggggatttcccgggctctgatcgacgtggcagtgttaccggtaga
ttccttattagtgaccgtaatgggatacatggggtgtactggctgaacagcgtggacgtc
ccctcctcctctctgctccgaggcaacaacaccatcttcctcacccagccgcttgccgtc
agccccttccaaggcctcatgtacgactacatccgcctcgagtcccctgatcctctctac
cacatcaccatctcttga
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