Tarenaya hassleriana (spider flower): 104816836
Help
Entry
104816836 CDS
T04125
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104816836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
HisKA
PAS_4
PAS_8
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
104816836
NCBI-ProteinID:
XP_010544123
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MSASRPARSSDDTRRSRHGARVIAQTTVDAKLHADFEESGSSFDYSSSVRVTGPVVEDQP
PRSDKVTTAYLLHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMTSHAVPSVGEH
PVLGIGTEIRTLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQTLPSGSMDRLCDTMVQEVFELTGYDRVM
AYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKV
LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVFNEDEGEGDVPDSAPPHK
RKRLWGLVVCHNTTPRFVPFPLRYACEFLSQVFAIHVSKELELENQIVEKNILRTQTLLC
DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIWKLGITPTDFQLQDIASWMSDYHRD
STGLSTESLYDAGFPGALALGDSVCGMAAVRITSKDMVFWFRSHTAGEIRWGGAKHDPDE
KDDSRKMHPRSSFKAFLEVVKTRCTPWKDYEMDAIHSLQLILRNTFKETDTIDVNTNVLH
SKLNDLKLDGIQELEAVTSEMVRLIETATVPILAVDADGSINGWNTKIAELTGLPVDEAI
GKNFPTLVEDSSVERVKKMLEMALEGTEEQNVQFEIKTHGSRVDAGPISLVVNACASRDL
HENVVGVCFVAQDLTAQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPS
MAKLTGCKREEVIDKMLLGEVFGTQMACCRLKNQEAFVNLGIVLNNAVTSQDSDKVSFAF
FTRNGKYIECLLCVSKKLDREGVVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALA
YIKRQIRNPLSGIMFSRKMMESTELGPEQRQLLHTSAQCQRQLSKILDDSDLDSIIEGYL
DLEMTEFSLNEILTAATSQVMMKSNGKSVRMTNETTEEVMNDTLYGDSIRLQQVLSNFML
MSVSFTPPGGQLTLMASLGKDQLGQSVHLAYLEIRITHTGAGIPELLLNEMFGSDEDVSE
EGMSLLISRKLVKLMNGDVHYLRQAGKSTFIITAELAAANK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctctaggcctgcccggtcttctgatgacaccaggcgatcgagacatggtgct
agggtcattgcacagaccactgtagatgcaaaactccatgctgatttcgaggaatcaggc
agttccttcgattactcgagctcggttcgagtcactggtcctgtcgtggaagaccaacca
ccgaggtctgacaaggtgactactgcttatcttcttcacatacagaagggtaagctgatt
caaccctttggatgtttgctggccttggacgagaagaccttcaaggtcattgcatacagc
gagaatgcccccgagatgttgaccatgactagccacgcagttcctagtgttggggagcac
cccgttcttggaatcgggacagaaataaggacccttttcactgctcctagtgcctctgcc
ctgcagaaggcactcggatttggggatgtttctctcttgaatcccattcttgttcactgt
aagacttctgcaaagcccttttacgcaattgtccacagggtaacagggagcatcatcgtt
gatttcgaacctgtgaagccctacgaagttcccatgacagctgctggtgctctacagtcg
tacaagcttgccgccaaagcaataaccagattgcagacattgcccagcgggagcatggac
aggctgtgtgatacgatggttcaggaggtatttgaactcacgggttacgacagggttatg
gcctataaattccatgatgatgatcatggtgaggttatctccgaggttacaaaacccggg
ctagagccttatcttggattgcattatccagccaccgacattcctcaagctgcccggttt
ctgtttatgaagaacaaagtcaggatgatagttgattgccgggcaaaacacgttaaggtg
cttcaagacgagaagctgccatttgatctcaccttgtgtggctcaacccttagggcaccc
cacagctgccatcttcagtatatggagaacatgagttcaattgcctctctcgtcatggcg
gtggtgtttaacgaggatgaaggagagggtgacgtccctgattctgcaccgcctcataag
aggaagaggctatggggtttggtggtgtgccataacacgaccccgagatttgttccgttt
cctcttaggtatgcctgtgaatttctatctcaagtgtttgctatacatgtcagcaaggaa
ctggaactggaaaatcagatcgtggagaagaacattttgcgtacacagacactattgtgt
gacatgctgatgcgtgatgctccactcggtatcgtgtctcagagtcccaacataatggat
cttgtgaaatgtgatggagcagctcttctgtacaagaacaagatctggaaactgggaata
actccaaccgacttccagctgcaagatattgcttcatggatgtctgattaccacagggat
tccacgggtttgagcacggaaagcttgtatgatgctggctttccgggggctctggctctc
ggagactcggtatgtggaatggcagcagtgaggataacttccaaggacatggttttctgg
ttccggtctcatactgctggagaaataagatggggtggtgcaaagcatgatcctgatgag
aaagatgattcgagaaaaatgcatcctaggtcatctttcaaggctttcctcgaggtggtc
aagacaaggtgtacaccctggaaggattatgaaatggatgccattcattccttgcagctc
attctgaggaatactttcaaggagaccgataccattgatgtgaacacaaatgtgctccac
tcgaagttaaatgatctaaaactcgatgggattcaagaactagaagctgtgacaagtgag
atggttcgcttgattgaaaccgccactgttccgattttggctgttgatgctgatggatcg
atcaatggttggaacaccaaaattgctgagctaaccggtcttccagttgatgaagccatc
ggaaagaatttccccacacttgttgaagattcttcggttgaaagggtcaagaagatgctg
gagatggcattggagggaactgaggagcagaacgttcaattcgagatcaagacacatggg
tcaagggtggatgcggggccaataagtttagttgtcaatgcatgtgcaagtagagatctc
catgaaaatgtggttggagtgtgtttcgttgctcaagatcttactgctcagaagaatgtg
atggacaagtttacccggatcgaaggtgactacaaggccatcatccagaacccgaaccca
ttgatccctcccatatttggtacggatgagttcggctggtgcacagaatggaacccatca
atggcaaagttaaccggatgtaaacgtgaggaagtgatcgacaagatgctgttgggagag
gtctttgggacacagatggcgtgctgccgtcttaagaaccaagaagcctttgtgaatctc
gggattgtgttgaataatgccgtgaccagtcaagactctgataaggtgtcctttgctttc
tttacgaggaacgggaagtatatagagtgtcttttgtgtgtgagcaagaaactggacagg
gaaggtgtagtaaccggtgtcttctgtttcctgcaacttgcaagccaagagcttcagcaa
gcgcttcatgtccagcgtctgtctgaacaaactgccttgaagagactgaaagctctagct
tacataaaaaggcaaatcaggaatcctctgtcggggattatgttttcgaggaaaatgatg
gagagcactgaattaggacccgagcaaagacagcttctgcacactagtgcacagtgccag
cggcaactcagcaagatcctcgatgattcagatctcgacagtatcattgaagggtacttg
gatctggaaatgacagagttcagcctgaatgagatattgactgctgccacaagtcaagtg
atgatgaagagcaatgggaagagtgtccggatgacgaacgagacaacagaagaagtgatg
aacgataccttgtacggggacagcatcaggcttcaacaagtgttgtccaatttcatgctg
atgtcagttagttttacgccgcctggagggcagcttactcttatggctagcctcgggaag
gatcaacttgggcaatctgttcatcttgcctaccttgagatcaggataacacatacggga
gctggaataccggaattgttgctaaacgagatgtttggaagtgatgaagatgtgtcggaa
gaagggatgagtcttctgattagccggaagctggtgaaactgatgaacggagacgtgcat
tacttaagacaggccgggaaatctactttcatcattactgctgaacttgcggctgcgaac
aaataa
DBGET
integrated database retrieval system
