Tarenaya hassleriana (spider flower): 104816933
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Entry
104816933 CDS
T04125
Name
(RefSeq) putative CCR4-associated factor 1 homolog 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104816933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104816933
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104816933
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104816933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
104816933
NCBI-ProteinID:
XP_010544273
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MIREIWRYNQAEEMALIADCLSSCPFIAIDTEFPGCLRNTPLTSSECERYSDMKFNVDRT
KLIQFGFTLFDSDCRIGGTWEVNFSGFSETEDARNEDSISFLRKNGLDFEQIREDGVCVH
GFFREFIRMIRFQEQLLWITFHGSYDIAYLSKMMTRSPLPCTSEGFTDVVGKTLGRVYDM
KAMASRIRGLNQRFGLEKLADELGVSRQGSAHHAGSDSLLTAQAFVRMAARCKDLCEYEG
FIYGMGSRVVSKRLVPQAESMPSSYTRCFDEPPRMYTAAFSSYRDGNFVVPVPPIHYGFS
GFM
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatccgggagatttggaggtataaccaggcggaagagatggcattgatcgccgactgt
ttatcctcttgtccattcatcgcgatcgatacggagtttcccggctgtctccggaacacg
cccttgacttcttccgagtgcgaacgatactccgacatgaagttcaacgtcgatcgcacc
aaactcatccagttcggattcaccctcttcgattccgactgcaggatcggcggtacgtgg
gaagtcaacttctctggcttcagtgaaaccgaggatgccaggaacgaggactcgatctct
tttttgcggaagaacggtctcgatttcgaacagatccgagaggacggtgtttgcgttcac
gggttcttccgtgagttcattcggatgatcagatttcaagagcagctgttatggatcacc
ttccacgggtcttacgacatcgcctacctcagcaagatgatgacccgatcgcccctaccc
tgcacgtcagagggattcacagacgtggtggggaagacgcttggcagagtgtacgacatg
aaagccatggcatcgaggatcagagggctcaaccagcggttcggactggagaaactggcg
gacgaactcggagtgagccgtcaaggatccgcacatcatgcaggatcggacagcctattg
acggcccaggctttcgttcggatggctgcgaggtgcaaagacctctgcgagtacgaagga
ttcatctatgggatgggctctcgggtcgtctcgaaacgtcttgtcccgcaggccgagtcg
atgccttcctcgtacactagatgtttcgacgagccaccgaggatgtacaccgcggcgttc
tcctcttatcgcgacggtaacttcgtcgtaccggtgccgccgatacactatggtttctcg
ggattcatgtga
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